Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo132g00001 ATGCAGCATTTTGTTTCCAAATTCTATGGAACCACCTTTCTTGTTATTTACGGTATGGTTATTATGGGGATAGTATTGGAGTTAGGAGCCGCCCCTGCTCCTGCTCCTGCACAATTGCTGTCTCCATCCGAAGCAAATGCTATAATCAATAGTGGATGGTGGAATGGATTGCAATCAGATTCAGATGATATCTGTTCGTGGATTGGTATACTTTGCAACGATGCTGGAAGCATAACTAGTATCAGATATCCGTATTTTACACGAGGGATTCAGTTAGCAACACTGAACCTCTCTGCTTTCAAGAATTTAGAATGGCTAGATGTCTCGTACAGTGGACTAGAAGGGACTATCCCACATAAAATTGGCTCTATTCCTCGTGAATTGCTTTTCCTGAAAAATCTTGTTGTCTTGAATCTATCAAATAATGAAATCAATTATGGGGTAAGGTTTCCTACAATTACAAATCTCACAAAATTGAAAAAGCTTGACATTTCCTACAATTCCCTTGATGGTGAAATACTTCCTTCACTGGGAAATCTTTCCCAATTAGAGAGCCTTGTGATATCTAACAACTTCATTCAAGGCTCCATTCCTCGTGAACTTCTGTTCCTGAAAAATCTTACCGTCTTAGATCTATCAAACAATAAAATCAATGGAACCTTGCTCATTTCAATTACAAATTTCACAAAATTGAAACAGCTTGACATTTCCTACAATTCTATTGATGGTGAGATACCTCCTGCACTGGGCAATCTTACCCAATTAGAGAGCCTAATCATCTCTCACAACAACATTCAAGGCTCCATTCCGCAGAACTTGGTTTTCTTGAAAAATCTTACTTTATTAGATCTATCGGCCAACAGAATCAGTGGGGCCTTGCCCATTTCACTGACAAATCTCACAAAATTAAAATTCCTTGACATTTCCCACAGTCTACTTACTGGTTCCCTAAAACCCTTGGGTGAAATTCCACCAGAGCTTCGATATTTGCCATCCTTAAAAACTCTGGATCTAAGCTACAATAATCTTACTGGAACGGTTCCTCTGTCTCTGCATCATTTCTCTGATGTGGACCTTTCCTTCAATAATTTGAACGGTCCTATTCCAGATGGTTTCCCTGTGTCTGCGCTAACAGGAAACGAGGGTGTATATTACCAAACCAAATTTCAATTCAAGCCTTGTACAGCCTGCGGCAACAAAGTGAGGCGCAATCAGCTGGTCATAGTTCTTCCTATCATCATTTTTCTAATCATCGTCTTCTTACTACTTCTGTATCTGAGGCACATTCGCATTGTAATTAAGAGCAAACATGCAAAGACAATGGCAGCCAGTAAGAATGGGGACTTGTTCTGTATATGGAACTATGATGGAAACATAGCCTATGAAGACATCATTACAGTAACTGAAGACTTTGACATGAGATATTGTATTGGAACAGGTGCGTATGGGAGTGTTTATAGGGCACAATTACCAAGTGGCAAGATTGTTGCTGTGAAAAAACTCCATGGCTTCGAAGCAGAGGTGCTGGCATTTGACGAGAGTTTCAGAAACGAGGTCAAAGTATTATCAGAAATAAAGCATCGACATATCATCAAGCTCCATGGATTCTGCTTGCACAGAAGAATCATGTTTTTGATCTATGAGTACATGGAGAAAGGAAGCTTGTTTTCTGTCTTGTATGATGATGTGGAAGCGATGGAATTGGATTGGAGAAAGAGGGTTAACATTGTGAAAGGCACTGCACATGCTCTGTCATATCTTCATCATGACTGCACCCCTCCAATAGTGCACAGAGACATATCAGCCAGCAATGTCTTGCTTAACTCAGAGTGGGAGCCCACTGTTTCAGACTTTGGCACAGCCCGATTCCTCAGCCTAGATTCATCCAATCGAACTATAGTTGCTGGAACCATTGGGTACATAGCGCCAGAGCTTGCATATACTATGGTTATGAGTGAAAAGTGTGACGTGTATAGCTTTGGAGTGGTGGCACTTGAAACTTTGATGGGATTGCATCCTAAGGAAATACTGTCTTCACTTCAATCAGTTTCTACTGATCATGGCATCACATTATGTGAAATATTGGACCAACGCCTCCCACAGCCAACAATGTCAGTTTTACTAGACATAGTTCGTGTTGCCATAGTCGCATTTGCATGCTTAAATCCCAATCCTTGCTCTCGCCCAACAATGAAACACGTCTCTCAATGTTTTCTTAGCCAGCTCACACCATTAAACATTCCTTTGCGTGAAATTTCATTGCAGCAGCTCATGAGTCAAGAACTCAAGCATTATTTAAATTTGTGA 2307 0.4053 MQHFVSKFYGTTFLVIYGMVIMGIVLELGAAPAPAPAQLLSPSEANAIINSGWWNGLQSDSDDICSWIGILCNDAGSITSIRYPYFTRGIQLATLNLSAFKNLEWLDVSYSGLEGTIPHKIGSIPRELLFLKNLVVLNLSNNEINYGVRFPTITNLTKLKKLDISYNSLDGEILPSLGNLSQLESLVISNNFIQGSIPRELLFLKNLTVLDLSNNKINGTLLISITNFTKLKQLDISYNSIDGEIPPALGNLTQLESLIISHNNIQGSIPQNLVFLKNLTLLDLSANRISGALPISLTNLTKLKFLDISHSLLTGSLKPLGEIPPELRYLPSLKTLDLSYNNLTGTVPLSLHHFSDVDLSFNNLNGPIPDGFPVSALTGNEGVYYQTKFQFKPCTACGNKVRRNQLVIVLPIIIFLIIVFLLLLYLRHIRIVIKSKHAKTMAASKNGDLFCIWNYDGNIAYEDIITVTEDFDMRYCIGTGAYGSVYRAQLPSGKIVAVKKLHGFEAEVLAFDESFRNEVKVLSEIKHRHIIKLHGFCLHRRIMFLIYEYMEKGSLFSVLYDDVEAMELDWRKRVNIVKGTAHALSYLHHDCTPPIVHRDISASNVLLNSEWEPTVSDFGTARFLSLDSSNRTIVAGTIGYIAPELAYTMVMSEKCDVYSFGVVALETLMGLHPKEILSSLQSVSTDHGITLCEILDQRLPQPTMSVLLDIVRVAIVAFACLNPNPCSRPTMKHVSQCFLSQLTPLNIPLREISLQQLMSQELKHYLNL 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo132g00001 768 Gene3D Ribonuclease Inhibitor 320 394 IPR032675 -
Pumo132g00001 768 Gene3D Ribonuclease Inhibitor 124 220 IPR032675 -
Pumo132g00001 768 PANTHER LEUCINE RICH REPEAT KINASE 2 95 741 - -
Pumo132g00001 768 Gene3D Ribonuclease Inhibitor 38 123 IPR032675 -
Pumo132g00001 768 Gene3D Ribonuclease Inhibitor 221 319 IPR032675 -
Pumo132g00001 768 SMART LRR_typ_2 204 227 IPR003591 -
Pumo132g00001 768 SMART LRR_typ_2 276 299 IPR003591 -
Pumo132g00001 768 SMART LRR_typ_2 156 180 IPR003591 -
Pumo132g00001 768 SMART LRR_typ_2 330 353 IPR003591 -
Pumo132g00001 768 SMART LRR_typ_2 228 252 IPR003591 -
Pumo132g00001 768 Pfam Protein kinase domain 477 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo132g00001 768 Gene3D Phosphorylase Kinase; domain 1 431 549 - -
Pumo132g00001 768 SUPERFAMILY Protein kinase-like (PK-like) 456 736 IPR011009 -
Pumo132g00001 768 Pfam Leucine rich repeat 206 265 IPR001611 GO:0005515
Pumo132g00001 768 ProSitePatterns Tyrosine protein kinases specific active-site signature. 595 607 IPR008266 GO:0004672|GO:0006468
Pumo132g00001 768 FunFam MDIS1-interacting receptor like kinase 2 550 744 - -
Pumo132g00001 768 SMART LRR_sd22_2 156 182 - -
Pumo132g00001 768 SMART LRR_sd22_2 228 254 - -
Pumo132g00001 768 SMART LRR_sd22_2 276 302 - -
Pumo132g00001 768 SMART LRR_sd22_2 330 359 - -
Pumo132g00001 768 SMART LRR_sd22_2 204 227 - -
Pumo132g00001 768 ProSitePatterns Protein kinases ATP-binding region signature. 477 500 IPR017441 GO:0005524
Pumo132g00001 768 PRINTS Leucine-rich repeat signature 207 220 - -
Pumo132g00001 768 PRINTS Leucine-rich repeat signature 330 343 - -
Pumo132g00001 768 SUPERFAMILY L domain-like 55 374 - -
Pumo132g00001 768 Pfam Leucine Rich Repeat 158 180 IPR001611 GO:0005515
Pumo132g00001 768 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 125 221 - -
Pumo132g00001 768 FunFam Leucine-rich repeat protein kinase family protein 435 549 - -
Pumo132g00001 768 Pfam Leucine Rich repeat 330 345 IPR001611 GO:0005515
Pumo132g00001 768 FunFam Leucine-rich repeat receptor protein kinase EMS1 222 320 - -
Pumo132g00001 768 Gene3D Transferase(Phosphotransferase) domain 1 550 744 - -
Pumo132g00001 768 ProSiteProfiles Leucine-rich repeat profile. 332 353 IPR001611 GO:0005515
Pumo132g00001 768 ProSiteProfiles Protein kinase domain profile. 471 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo132g00001 119 643 Receptor kinase-like Gene Family AT4G08850 40.328 3.75e-115 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo132g00001 Pkinase 6.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo132g00001 - - gmx:102666504 1013.83