Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo126g00008 ATGAGCTTGGCCTTTAACATAAGATTTTTATGGGTGGTCTTGTTTGTGTCATTCAAATTCAACCTGGTCTTGTGTATTGAAATTGAGGAATACTACCCAGAAGAAAGAGATGCTTTGATGCTCATAAGGGATTCTTTGAATTCTTCTGTCAATTTGCATGGGAATTGGACAGGCCCTCCTTGCATAGACAATCAGAGTAGATGGATTGGTATCACTTGTTCAAATTGGCATGTTGTTCAAATTGTTCTTCAAGGAGTTAACCTTAGTGGTTATTTACCTCCCACATTCCTTGAAAACATAACTTTCTTGAACCAACTTGACTTCAGAAACAATGCACTCTTTGGACCACTGCCAAGCCTCAAGAATTTGATGTTTTTGGAACAAGTTCTATTATCATTCAATCATTTCTCAGGGTCAATTCCTGTGGAGTATGTTGAAATTCCAAGTCTACAAGTGTTGGAGCTGCAAGAGAATTACCTAGATGGTCAAATTCCACCCTTTGATCAACCATCACTGACAAGTTTCAACGTGTCATATAATCATCTGTCAGGGCCTATTCCTGAAACTTCTGTGCTGCAAAGGTTCCCAGAGAGTTCATATGGTAATAATTCAGATCTTTGTGGAGAGCCATTGGATAAGTTATGTCCTATTGAACCTCCTGCCCCATCTCCATCTCCATTTTATGCACCACCTCCTTTTGTTTTTCCTCCAATTCCAGCACTGAAGCCAAATAAGAAGAGGTTTCAAGCATGGATTGTTGCTGTAATTGGTGCTGCAGCTGCACTGATTCTTTTCTCTCTGATCATTATTATTGCTTTCTTGTTTCGTAAAAGACGAACAAGTGGAAAAGAATCAATAAGAAATAATTCATCAGGGTATGTTTTTGGGGCATGGGCAAAGAAGATGGTGTCTTATGCTGGGAACAGTGATGTTTCTGATAGATTAGGCAAGTTGGAATTTTCCAACAAGAAATTTCCAGTTTTTGACTTGGATGATTTATTGAGGGCATCAGCAGAAGTGCTAGGAAGAGGGAACTTAGGCATTACATACAAAGCAACACTTGAAACAGGAACTGTTGTTGCAGTGAAGAGACTTAACCACATGAATGAACTGAGCAAGAAGGAATTTCTCCAACAGATGCAATTGCTAGGACAGATGAAGCATGAAAATCTAGTAGAAATCATTTCCTTTTATTATTCAGAGGAGCAAAAGTTGATCATATATGAATTTATCTATGATGACTCTTTGTTTGAACTCCTACATGAGGGTAGAGCAGTTGGAAGAATGCCACTTGATTGGACCACAAGACTTTCCATTATCAAAGATATAGCAAAGGGTCTTGCTTTCCTTCACCATTCTTTGCCTCAACACAAGGTCCCTCATGCCAACCTCAAATCATCCAATGTCATAATCCATCAAGATAGTAAAGGCTACCATTCCAAGCTCACAGACTACGGTTTCTTCCCTCTACTCCCAGCCAAACAGCATGCTGAAAAGCTAGCCATAAGGAGGTCACCGGAATTTGTTACAGGGAAGAAGCTGACACATAAAGCTGATGTATATTGCTTTGGTATCATTATGCTAGAGATTATAACAGGCAAAATCCCTGGTCATATCTTAGGTGAAATTGAAGAAACAACCAATGATCTTTCAGATTGGGTAAGAACTGTGGTGAACAATGATTGGTCCACAGATATATTGGATTTAGAAATACTATCAGAAAAAGAAGGTCATGATGCAATGTTGAAACTGACAGAGTTAGCTCTAGAGTGTACAGATATGACACCAGAGAAGCGGCCTATAATGAATGTAGTATTGATGAGAATAGAAGAGATAGAGCAAATGAAAAAAGAGAATGACTAG 1863 0.3886 MSLAFNIRFLWVVLFVSFKFNLVLCIEIEEYYPEERDALMLIRDSLNSSVNLHGNWTGPPCIDNQSRWIGITCSNWHVVQIVLQGVNLSGYLPPTFLENITFLNQLDFRNNALFGPLPSLKNLMFLEQVLLSFNHFSGSIPVEYVEIPSLQVLELQENYLDGQIPPFDQPSLTSFNVSYNHLSGPIPETSVLQRFPESSYGNNSDLCGEPLDKLCPIEPPAPSPSPFYAPPPFVFPPIPALKPNKKRFQAWIVAVIGAAAALILFSLIIIIAFLFRKRRTSGKESIRNNSSGYVFGAWAKKMVSYAGNSDVSDRLGKLEFSNKKFPVFDLDDLLRASAEVLGRGNLGITYKATLETGTVVAVKRLNHMNELSKKEFLQQMQLLGQMKHENLVEIISFYYSEEQKLIIYEFIYDDSLFELLHEGRAVGRMPLDWTTRLSIIKDIAKGLAFLHHSLPQHKVPHANLKSSNVIIHQDSKGYHSKLTDYGFFPLLPAKQHAEKLAIRRSPEFVTGKKLTHKADVYCFGIIMLEIITGKIPGHILGEIEETTNDLSDWVRTVVNNDWSTDILDLEILSEKEGHDAMLKLTELALECTDMTPEKRPIMNVVLMRIEEIEQMKKEND 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo126g00008 620 Gene3D Transferase(Phosphotransferase) domain 1 413 620 - -
Pumo126g00008 620 SUPERFAMILY Protein kinase-like (PK-like) 339 609 IPR011009 -
Pumo126g00008 620 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Pumo126g00008 620 FunFam Leucine-rich repeat receptor-like protein kinase 125 217 - -
Pumo126g00008 620 Pfam Protein kinase domain 338 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo126g00008 620 Gene3D Ribonuclease Inhibitor 32 217 IPR032675 -
Pumo126g00008 620 ProSiteProfiles Protein kinase domain profile. 335 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo126g00008 620 SUPERFAMILY L domain-like 32 195 - -
Pumo126g00008 620 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 617 IPR046959 -
Pumo126g00008 620 Gene3D Phosphorylase Kinase; domain 1 303 410 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo126g00008 35 613 Receptor kinase-like Gene Family AT2G36570 35.220 1.30e-104 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo126g00008 Pkinase 1.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo126g00008 - - gmx:102668068 1068.91