Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo125g00006 ATGGCTGATAAGAACATCGAGGTGTGGAAAATCAAGAAATTGATCAAAGCTCTCGAGGCTGCTAAAGGAAACGGAACTAGTATGATTTCCCTTTTCATGCCCCCGCGTGATCAAATATCTCCCCTCACCAAGCTTCTTGGTGATGAGTTTGGAACTGCATCAAATATCAAAAGCTTGAGGCTTAAGCTCTACAACAAGGTTCCACCAAATGGGCTTGTTCTGTTCACTGGCACAGTTGTGACTAAAGATGGGAAGGAAAAGAAGGTGACTATTGATTTTGAGCCTCTTAGGCCAATCAATGCATCCCTTTATCTTTGTGACAATAAGTTTCATACTGAAGCCTTGAATGAGCTTCTGGAGTGTGATGACAAGTTTGGATTTATTGTCGTGGATGGCAATGGCACCTTGTTTGGGACCTTGAGTGGTAACACAAGAGAGGTGCTTCATAAATTCAGTGTGGATCTCCCAAAGAAGCATGGAAAAGGAGGGCAATCAGCTCTACGTTTCGATCGTCTTCGCATGGAGAAGCGCCATAACTACGTGAGGAAGACGGCAGAGCTTGCTACTCAGTTCTATATTGATCCTGCCACCAACCAACCCAATGTTTTGTGGTCGGACATGTTTGATCCTCGGCTTCGGGCAAAGATACTCAATGTTGTTGATGTCTCGTTTGGAGGCGAGGATGGGTTTAATCTTGCTATTAGACTGTCTGCTGAGATTTTGTGCAACTTGAAGTTTGTCCAGGGAAGCGGTTGA 756 0.4458 MADKNIEVWKIKKLIKALEAAKGNGTSMISLFMPPRDQISPLTKLLGDEFGTASNIKSLRLKLYNKVPPNGLVLFTGTVVTKDGKEKKVTIDFEPLRPINASLYLCDNKFHTEALNELLECDDKFGFIVVDGNGTLFGTLSGNTREVLHKFSVDLPKKHGKGGQSALRFDRLRMEKRHNYVRKTAELATQFYIDPATNQPNVLWSDMFDPRLRAKILNVVDVSFGGEDGFNLAIRLSAEILCNLKFVQGSG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo125g00006 251 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 3 120 IPR024049 -
Pumo125g00006 251 Gene3D eRF1 domain 2 116 242 IPR042226 -
Pumo125g00006 251 Gene3D eRF1 domain 1 1 115 IPR024049 -
Pumo125g00006 251 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 2 248 IPR004403 GO:0003747|GO:0006415
Pumo125g00006 251 SUPERFAMILY Translational machinery components 122 241 - -
Pumo125g00006 251 Pfam eRF1 domain 2 124 241 IPR005141 -
Pumo125g00006 251 SMART eRF1_1_2 1 120 IPR005140 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo125g00006 3 248 Eukaryotic Initiation Factors Gene Family AT5G47880 77.174 4.21e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo125g00006 K03265 - gmx:100785916 418.313