Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02303 ATGGCACCTTTTCTCCTTAATCACCCCTTCTTCTTCATTTTCCTTTTCTGTCTTCCAGCCATAAACACACTCTCCACTGTTTCCATTTCTGAAACTTCCAATTCCAACCAAACATTTATTTGTGTCCTGCAACATCCAAACCAACAAGGACAATCAAATCTCAACTGTACCAGCTTCCCTCAGGCTCAGGCTCAGGCTATTACACTTGATGTAAATCCCAATGTTTCCTACTCTCAGATTGTGGGCGGCAATGGGTTTGTATGTGCTTTAGGACCATCATCTTCTTCCATGTCCATCATGGGTTGTTGGAGATTCTCTGCCAATGCTACTAATGTTCCCTATAAGCGCATCTACCGTGGACTCGTTGTGGAAGATATTGACAGTGGCAACTCCCACGTTTGTGGTCTTGTAAGAAAAGGGAATAACAACAGCCTTGAGCTTGAGTGTTGGCAATGGCATGGCTTCAATTCAAGCATGTCAATGTCCATGTCAAGCGTTGCCGTAGGAGAGAATTTCGTATGTGGGTTATCACAGAGAGGGGATGTTAATTGCACCGAGACGGGGAGGGGTAATAGTAGTAGAGTTGTTGTCGATGTGCCTGCGCCTGGTGGGAATTACACTTTTCTCGCTGCTGGGTTTAGGCATGCCTGTGTCATCTCTGGTGATGGTAGCTTGCATTGTTGGGGAGACTCAAACATGGAGGGTCAGAAACCACAAGGGAGGTTCATTTCTTTGGCCTTGGGAGAGAACCGAAGCTGTGCACTTGGGCACGACAGAAGAGTTGTGTGTTGGGGGTCCAATAATTTCAGCATGCCACACAGATTGCAAGACACTTTTTTCGAATCAATTGTGGCAAAGCGAAGTGTTTTCTGCGGAGTCGTGTCTTCTGATTATTCCTTGCATTGTTGGGGTTCCGAAATTTTTGATTCAGACAGCAAGGTGTTTGACGATGTCCTCCCAGGACCTTGTCGGAACGAGTGTCCGTGTGGGCCCTTGCCCAACTCTGCCAAACTATGTAACTCTCCTGCCGTCATTTGTCAACCGTGTTCCCCCCAAGTGGTTCAATCTCCATTCCAGCCATCATCAAATCACAGTAATAGTACTAGTACTAGTAGTGGTTGGAGCAGCCAAATGGTGGCATTTCTAGTGGTTGGATGTGTGGGTTGCAGTTCCCTATTGCTAGTCATGGCTTTCTTCCTTTACAGGTACTGCAACTCCAAACGTAGAGGAAGCCGTGTCCATGACTCTGGCCGGTTGGATGATGATGAGTCATCCCAGCCACAAGCTGAATCTCGTGTTCTTGAGAAGCGTTTGAGCCACGTCATCAGCATGGGAAATGGGAGCCCTTTGGAGGAGTTTTCCCTGGAGACACTTGTTCAAGTCACCAACAATTTCTGTGAGGACAAAAGAATTGGGATTGGCAGCTTCGGTGCAGTGTATCATGCCACGCTGGAGGACGGCAAGGAGGTTGCTATAAAAAGAGCCGAAGCCTGCTCCTCCTCCACCTACACAGTTTTGGGTGGGCATGGCCAAGTGGACAAAGACAATGCCTTTGTGAACGAGCTTGAATCTCTGTCAAGACTCCACCACAAGAACCTGGTCCGCTTGGTGGGGTTCTATGAAGACAGCAAGGAACGCATTTTGGTGTACGAGTACATGGACAATGGGAGCCTGAGTGACCATCTCCACAAGCTCCAAAGTTCATCTCTCAATCTCATGTCATGGCCAGTGCGCATCAAGGTGGCTCTAGATGCTGCGAGAGGCATACAGTATTTACACCAATACGCCACTCCACCAATCATTCACCGCGACATCAAGTCTTCCAACATATTATTGGATGCCAAGTGGACCGCCAAAGTGTCTGATTTTGGACTGTCCCTCATGGGCCCTGACCCTGAAGATGAGGAGGCCCACCTTTCCCTTCTGGCGGCTGGCACTGTTGGCTACATGGACCCTGAATACTATAGGCTTCAGCATTTGACTCCCAAGAGTGACGTCTACAGCTTTGGCGTGGTTTTGCTAGAGTTGCTCTCTGGCTACAAGGCCATCCATAAAAACGAGAATGGGGTGCCAAGAAATGTCGTTGATTTTGTTGTGCCCTTTATTGTTCAAGATGACATCCACAGAGTGTTGGACACAAGACTGCCCCCACCCACACCCTTCGAGATAGAGGCCGTGGCCTTTGTGGGTTATTTGGCTGCAGATTGTGTTAGGCTAGAAGGTCGAGATAGACCAACCATGTCTCAAGTTGTGAATAACTTGGAAAGAGCATTGGCTGCATGTTTAGCCCAACCAATACTCTCTAGGTCCACCACTGATTCTATTTCTTCACAATAG 2337 0.4805 MAPFLLNHPFFFIFLFCLPAINTLSTVSISETSNSNQTFICVLQHPNQQGQSNLNCTSFPQAQAQAITLDVNPNVSYSQIVGGNGFVCALGPSSSSMSIMGCWRFSANATNVPYKRIYRGLVVEDIDSGNSHVCGLVRKGNNNSLELECWQWHGFNSSMSMSMSSVAVGENFVCGLSQRGDVNCTETGRGNSSRVVVDVPAPGGNYTFLAAGFRHACVISGDGSLHCWGDSNMEGQKPQGRFISLALGENRSCALGHDRRVVCWGSNNFSMPHRLQDTFFESIVAKRSVFCGVVSSDYSLHCWGSEIFDSDSKVFDDVLPGPCRNECPCGPLPNSAKLCNSPAVICQPCSPQVVQSPFQPSSNHSNSTSTSSGWSSQMVAFLVVGCVGCSSLLLVMAFFLYRYCNSKRRGSRVHDSGRLDDDESSQPQAESRVLEKRLSHVISMGNGSPLEEFSLETLVQVTNNFCEDKRIGIGSFGAVYHATLEDGKEVAIKRAEACSSSTYTVLGGHGQVDKDNAFVNELESLSRLHHKNLVRLVGFYEDSKERILVYEYMDNGSLSDHLHKLQSSSLNLMSWPVRIKVALDAARGIQYLHQYATPPIIHRDIKSSNILLDAKWTAKVSDFGLSLMGPDPEDEEAHLSLLAAGTVGYMDPEYYRLQHLTPKSDVYSFGVVLLELLSGYKAIHKNENGVPRNVVDFVVPFIVQDDIHRVLDTRLPPPTPFEIEAVAFVGYLAADCVRLEGRDRPTMSQVVNNLERALAACLAQPILSRSTTDSISSQ 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02303 778 Gene3D - 156 374 IPR009091 -
Pumo11g02303 778 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 76 768 IPR044815 GO:0004674
Pumo11g02303 778 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Pumo11g02303 778 CDD STKc_IRAK 471 756 - -
Pumo11g02303 778 MobiDBLite consensus disorder prediction 410 430 - -
Pumo11g02303 778 Gene3D Transferase(Phosphotransferase) domain 1 553 765 - -
Pumo11g02303 778 Gene3D Phosphorylase Kinase; domain 1 425 552 - -
Pumo11g02303 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Pumo11g02303 778 ProSiteProfiles Protein kinase domain profile. 465 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02303 778 Pfam Protein kinase domain 467 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02303 778 SMART serkin_6 465 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02303 778 Pfam Regulator of chromosome condensation (RCC1) repeat 209 236 - -
Pumo11g02303 778 SUPERFAMILY Protein kinase-like (PK-like) 441 754 IPR011009 -
Pumo11g02303 778 FunFam PTI1-like tyrosine-protein kinase 3 553 764 - -
Pumo11g02303 778 SUPERFAMILY RCC1/BLIP-II 83 307 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02303 Pumo-Chr11 55621728 55624292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02303 23 772 Receptor kinase-like Gene Family AT5G47850 50.065 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo11g02303 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02303 - - gmx:100305418 1356.66