Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02302 ATGGCCAAGAGTCCCAGTCTCTTTCACTTTTTCCAGTTCTTGGCAATGCTGTTACTTACTTCCTACTCTATTTTCCCGCCTTGTGTGTCTCTGACGTTGGAAACTCAAGCTCTTCTTCAGTTCAAAAACCATTTGAAGGACTCCTTGAATTCTTTGGCTTCGTGGAACGAATCAGATTCTCCATGCAAGTTTTATGGAATTACATGTGATCCAGTTTCTGGGAGAGTCACAGAAATCTCACTGGACAATAAGTCCCTCTCTGGTGACATTTTCCCATCTCTCTCGGTTCTGCAGAGCCTGCAAGTTCTGTCACTCCCATCCAATTTAATTTCTGGAAAGCTTCCATCAGAGATAAGCAGGTGTACCAACCTGAGAGTGTTGAATCTAACAGGAAATCAATTGGTTGGAGCAATTCCAGACTTGTCTGGGCTGAGAAACCTGCAGGTTCTTGACCTTTCAGCAAACTACTTTTCTGGCAGCATCCCCAGCTGGGTGGGGAATCTAACTGGACTGGTTTCACTGGGTCTTGGGGAAAATGACTACAATGAGGGTGAGATTCCAGAGACTCTTGGAAATCTGAAGAACGTGACCTGGCTCTATCTTGGTGGCTCCCAGTTGGTAGGAGAGATTCCAGAATCACTATATGAAATGAAGGCATTGGAGACACTGGATATTTCAAGAAACAAGATCTCTGGCAGACTCTCCAGATCAATTTCCAAGTTAGAGAATCTTTACAAGATTGAGCTCTTCTCAAATAATTTGACAGGAGAGGTACCAGTCGAGCTTGCAAACCTCACCAATCTGCAGGAGATTGACCTTTCTGCAAACAATATGTATGGTAGGTTGCCAGAGGAAATTGGTAATATGAAGAACCTGGTTGTTTTTCAACTATATGAAAACAACTTTTCTGGAGAACTTCCTGCTGGATTTGCAGATATGCGTCATCTCATTGGGTTCTCAATTTATAGAAACAGCTTCACTGGGACAATTCCAGAAAATTTTGGCCGTTTTTCACCACTTGAAAGTATTGACATATCTGAGAATCAATTTTCAGGTGATTTCCCAAAGTTCTTGTGTGAAAAGAGGAAGTTGAGGTTTTTGCTCGCATTGCAAAACAATTTCTCTGGGACTTTTCCGGAGTCTTATGTTACATGTAAATCTCTGGAGAGGTTTAGGATTAGTATGAACCGGTTATCCGGGAAAATTCCAGATGAGGTTTGGGCACTTCCATATGTAAATATAATTGATTTGGCCTATAATGATTTCACCGGTGTGGTACCTTCAGAAATTGGGTTGTCTACTAGCTTAAGTCAGATAGTTTTGACAAAGAACAGGTTTTCAGGTATGCTCCCATCAGAGCTTGGCAAGCTGGTGAACTTGGAGAAGCTTTACTTGAGCAACAATAATTTCTCTGGTGAAATACCACCTGAAATTGGATCTCTGAAACAATTATCCTCTTTGCATCTAGAAGAGAATTCGTTAACCGGATCAATACCCACAGAACTGGGTCATTGTGCAAGGCTGGTGGACTTGAATCTTGCTTGGAATTCTCTATCTGGAAATATCCCCCAGTCAGTTTCACTTATGAGCTCATTGAACTCCCTTAACATATCTGGAAACAAACTTACAGGTTCTATTCCAGATAATTTAGAAGCAATAAGGCTAAGCTCGGTGGACTTTTCTGAAAACCTGCTTTCTGGAAGAATTCCATCTGGTCTTTTTATTGTTGGAGGACAGAAAGCTTTTCTTGGAAACAAGGGGTTGTGTGTTGAGGGAAACCTAAAACCTTCCATGAATTCTGATTTGAAGATTTGTGCCAAAAATCATGGTCGGCCAAGGGTCTCTGCTGATAATGTTGTCTTGTTCTTTTTCATTGCTTCCATTTTTGTTGTTATTTTAGCCGGGTTGCTGCTTTTGAGTTGTAGAAGCCTCAAGCATGATGCGGAAAAAAACTTGCAAGGTCAAAAGGAAGTAAGTCAAAAATGGAAACTTGCATCTTTCCACCAAGTAGATATTGATGCCGATGAAATATGTAATCTGGATGAAGATAATTTGATAGGTAGTGGTGGTACAGGAAAGGTTTATCGAGTGGAGTTGAGGAAAAATGGAGCCATGGTGGCTGTCAAGCAACTAGGGAAAGTAGATGGTGTGAAAATTTTAGCTGCAGAGATGGAGATTTTGGGGAAAATTAGGCATAGAAATATACTTAAACTCTATGCTTCTTTACTTAAAGGAGGATCCAACCTTTTAGTGCTTGAGTACATGCCAAATGGTAATCTTTTTCAAGCTCTTCACAGACAGATAAAAGATGGGAAGCCAGACTTGGATTGGAACCAGAGGCATAAAATTGCTCTGGGAGCTGCAAAAGGAATTGCATATTTACACCATGACTGCAACCCACCAATTATTCACAGGGATATAAAATCCAGCAACATTTTGCTTGATGAGGATTATGAGCCAAAAATTGCTGATTTTGGTATTGCAAGGTTTGCAGAAAAATCTGATAAGCAGTTGGGTTATAGCTGTCTAGCTGGCACACTTGGTTATATTGCTCCAGGTAAGTTTGCAAATGCTTTCTTTCAACTGGGAATTTCAGTATACTGTTTATGTTTCAGAAGCATCTCATGTTCATGTTTGACACTGTTCAGAAGCATCTCAATATATTTGTGA 2670 0.4056 MAKSPSLFHFFQFLAMLLLTSYSIFPPCVSLTLETQALLQFKNHLKDSLNSLASWNESDSPCKFYGITCDPVSGRVTEISLDNKSLSGDIFPSLSVLQSLQVLSLPSNLISGKLPSEISRCTNLRVLNLTGNQLVGAIPDLSGLRNLQVLDLSANYFSGSIPSWVGNLTGLVSLGLGENDYNEGEIPETLGNLKNVTWLYLGGSQLVGEIPESLYEMKALETLDISRNKISGRLSRSISKLENLYKIELFSNNLTGEVPVELANLTNLQEIDLSANNMYGRLPEEIGNMKNLVVFQLYENNFSGELPAGFADMRHLIGFSIYRNSFTGTIPENFGRFSPLESIDISENQFSGDFPKFLCEKRKLRFLLALQNNFSGTFPESYVTCKSLERFRISMNRLSGKIPDEVWALPYVNIIDLAYNDFTGVVPSEIGLSTSLSQIVLTKNRFSGMLPSELGKLVNLEKLYLSNNNFSGEIPPEIGSLKQLSSLHLEENSLTGSIPTELGHCARLVDLNLAWNSLSGNIPQSVSLMSSLNSLNISGNKLTGSIPDNLEAIRLSSVDFSENLLSGRIPSGLFIVGGQKAFLGNKGLCVEGNLKPSMNSDLKICAKNHGRPRVSADNVVLFFFIASIFVVILAGLLLLSCRSLKHDAEKNLQGQKEVSQKWKLASFHQVDIDADEICNLDEDNLIGSGGTGKVYRVELRKNGAMVAVKQLGKVDGVKILAAEMEILGKIRHRNILKLYASLLKGGSNLLVLEYMPNGNLFQALHRQIKDGKPDLDWNQRHKIALGAAKGIAYLHHDCNPPIIHRDIKSSNILLDEDYEPKIADFGIARFAEKSDKQLGYSCLAGTLGYIAPGKFANAFFQLGISVYCLCFRSISCSCLTLFRSISIYL 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02302 889 ProSiteProfiles Protein kinase domain profile. 680 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02302 889 Gene3D Ribonuclease Inhibitor 239 315 IPR032675 -
Pumo11g02302 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Pumo11g02302 889 SUPERFAMILY Protein kinase-like (PK-like) 677 871 IPR011009 -
Pumo11g02302 889 Pfam Leucine Rich Repeat 459 481 IPR001611 GO:0005515
Pumo11g02302 889 Pfam Leucine Rich Repeat 220 241 IPR001611 GO:0005515
Pumo11g02302 889 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
Pumo11g02302 889 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Pumo11g02302 889 Pfam Protein kinase domain 682 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02302 889 FunFam Leucine-rich receptor-like protein kinase family protein 670 754 - -
Pumo11g02302 889 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 217 856 - -
Pumo11g02302 889 FunFam Probable inactive receptor kinase RLK902 31 190 - -
Pumo11g02302 889 SMART serkin_6 680 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02302 889 SMART LRR_typ_2 457 480 IPR003591 -
Pumo11g02302 889 SMART LRR_typ_2 97 121 IPR003591 -
Pumo11g02302 889 SMART LRR_typ_2 144 168 IPR003591 -
Pumo11g02302 889 SMART LRR_typ_2 481 505 IPR003591 -
Pumo11g02302 889 SMART LRR_typ_2 265 289 IPR003591 -
Pumo11g02302 889 SMART LRR_typ_2 529 553 IPR003591 -
Pumo11g02302 889 SMART LRR_typ_2 217 241 IPR003591 -
Pumo11g02302 889 ProSiteProfiles Leucine-rich repeat profile. 459 481 IPR001611 GO:0005515
Pumo11g02302 889 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Pumo11g02302 889 Pfam Leucine Rich repeats (2 copies) 122 162 IPR025875 -
Pumo11g02302 889 Gene3D Ribonuclease Inhibitor 316 599 IPR032675 -
Pumo11g02302 889 SUPERFAMILY RNI-like 263 571 - -
Pumo11g02302 889 SUPERFAMILY L domain-like 58 352 - -
Pumo11g02302 889 Gene3D Ribonuclease Inhibitor 184 238 IPR032675 -
Pumo11g02302 889 Gene3D Transferase(Phosphotransferase) domain 1 666 877 - -
Pumo11g02302 889 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Pumo11g02302 889 FunFam Protein kinase superfamily protein 755 830 - -
Pumo11g02302 889 FunFam Receptor-like protein kinase HSL1 291 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02302 Pumo-Chr11 55617434 55620103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02302 24 852 Receptor kinase-like Gene Family AT1G72180 57.706 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo11g02302 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02302 - - gmx:100789704 1548.87