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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pumo11g02292
ATGGTGGTCAACGAGAGACCCTCCAAGAGGATGAAGAGGAGGGTCACAGCTGATCTCTGTGATTTTCTTACTTTTCCGGCGGCCGGCGTTCCCGCCTCCGGCGAACCCTTCCGGAACTGTGTCCAGCGCTTCCTCTCTGACCATGCGCGCATCACTTTCCCTCCCTCGCTCTTTCCGTCACTCATGACGTGGCAGATCTTGTTCCGTGTCGGAGACATCGTCGACGGACCCGATCTCTCGCCGGCGATGGTCACTCTCGACATTGTCGAGGAGGACGTCACTCGTTCTCGTAGTTCAGTCTATTGTGACCAGTGCCGAGTCGTTGGGTGGAGTGGGCATCCGGTGTGTCGAAAGCGATACCATTTCATAATAAGGGCTGCGAGTGATGCCGAAGCATATCAAAGACCTTGTTCAAGATGTGGAAATCTTCTCCAATTATCTGAAACAAGGTGTAGATCGTGTAACTTTGCCATCACCGTTGATGACCTTGAGGATTGGGTGTATCTTCAGATTGAAGATAACACCCATCTTCTGCATGGTGTCGTCCATGCCAATGGTTATGGTCACCTGCTTACTCTTAATGGAAGAGAAGGTGGCTCGAAGCTTCTCTTTGGATCTGATATCATGAATTTCTGGGATAGGCTATGTGCTGCAATTTCTGTTAGGAAGGTTAGCGTGATGGATTTGTCCAAGAAATTTGGGCTGGAATACCGATTGCTTCATGCAATCACCAACGAACATTCCTGGTATGGCAATTGGGGTTATGAATTTGGAACTGGCAGCTATGCCCTAACCCAAGATGCATACAAGAATGCAGTGAATACCCTGTCAAGCATGCCCATGTCCTCATTTTCATTCCATGGTCGGGGACCAAGAAGCCGCCTGGAGTGTGTCATTTCTCTTTACCAGTCTTTGGCAGAAACTGAACTTTTGACGATCAAAGATCTCTTCTCCTTTTTGTTGACGTTGATTCATGAATGTCGAAAGCCAATGGCCATGAGGACATCTAAGCAAACCAGTAATTTATTGTGTGCTTGGACGGGAAATGATGTTGAAGAGGTGCAACATGCTTTGATCAAGGTATTGCTTGCATCGGGTGCCTGTACTGAGGCCAAATGGGTGACAAGGCGTGCTCTCAAGGGTGCAGTATGCAGGGGTGTTTCATCTCCAGAGCTTCTAGACTACTGTCTTAAGCACTTGCCAGGGAAATTAGCTGCCAATGGAATGATAGTTTGTTCACGATGCAACCCCATTTCCAGTGCCATCGAATTCAGGTTAGAACCTTGGTGTAATGGATTAAGCACAAATTCAAGCTATCCAACAGAAGTTCAACTGATCTCTGATTTGACATTCTTATTTTATTCAATTATTCATCCTGAAAAAATGGTGTGCTACAGACCTAAGATTATGCGGAAAAGGGTGGCTGATTCAGCCAGGAAGCTCCTTGACTGTAAACAGTTTATGAAGGATTACAAGCCATATGAAATGGCCGTTGAACTGCCTTCAGTCATTAGGCTGTGGTGTCATGTGGAGCTTTCTGATCAGCCTAAGGATGATCCATCCCCACCGCCAGAGCTAATTGTGCTGCCTTTGAATGCCACCGTTGCTGACCTTAAGAACGAAGCCACTAGTGCTTTTCAAGAGGTGTATGCAATGTACAAGAGGTTTCAAGCTGAGGAACTCCTAGGATACGGGTCAATCAGTGATTCGCTCACCATAAAGTTCTTGCTTGGAACAAGTGGATCAATCCAAATTCAAGGTAAATGTCCAGCTAAACATGGGCTAAGCCGATTCCGAATGGAACGAGGAACAGAGGTGTGGAAGGTGGATTGCACCTGCGGGGCTAGGGATGATGATGGAGAGAAAATGTTAGCATGTGATACCTGTGGCGTTTGGCAGCATACCAGATGTGCTGGAGTTGATAATACTGATGGAATGTCTTCTAAGTTTGTTTGTATGAGATGTGTCAACTTGTACCGTGAGGAAACTAAAAAATTACCAGCACCTGGTGAGGAAGCTAACGAGACCTGTAAATTCAACACATCTTGCAGAGATGAGGCAGTAGCAAGGGACTGTGCAACAGTTTCATCATGTAACATAGCTGTGAATTTTGGTGTACGTTGA
2124
0.4647
MVVNERPSKRMKRRVTADLCDFLTFPAAGVPASGEPFRNCVQRFLSDHARITFPPSLFPSLMTWQILFRVGDIVDGPDLSPAMVTLDIVEEDVTRSRSSVYCDQCRVVGWSGHPVCRKRYHFIIRAASDAEAYQRPCSRCGNLLQLSETRCRSCNFAITVDDLEDWVYLQIEDNTHLLHGVVHANGYGHLLTLNGREGGSKLLFGSDIMNFWDRLCAAISVRKVSVMDLSKKFGLEYRLLHAITNEHSWYGNWGYEFGTGSYALTQDAYKNAVNTLSSMPMSSFSFHGRGPRSRLECVISLYQSLAETELLTIKDLFSFLLTLIHECRKPMAMRTSKQTSNLLCAWTGNDVEEVQHALIKVLLASGACTEAKWVTRRALKGAVCRGVSSPELLDYCLKHLPGKLAANGMIVCSRCNPISSAIEFRLEPWCNGLSTNSSYPTEVQLISDLTFLFYSIIHPEKMVCYRPKIMRKRVADSARKLLDCKQFMKDYKPYEMAVELPSVIRLWCHVELSDQPKDDPSPPPELIVLPLNATVADLKNEATSAFQEVYAMYKRFQAEELLGYGSISDSLTIKFLLGTSGSIQIQGKCPAKHGLSRFRMERGTEVWKVDCTCGARDDDGEKMLACDTCGVWQHTRCAGVDNTDGMSSKFVCMRCVNLYREETKKLPAPGEEANETCKFNTSCRDEAVARDCATVSSCNIAVNFGVR
707
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pumo11g02292
707
CDD
PHD_MMD1_like
610
655
-
-
Pumo11g02292
707
ProSitePatterns
Zinc finger PHD-type signature.
611
655
IPR019786
-
Pumo11g02292
707
PANTHER
PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED
12
665
-
-
Pumo11g02292
707
Pfam
PHD-finger
611
657
IPR019787
-
Pumo11g02292
707
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
596
660
IPR013083
-
Pumo11g02292
707
SUPERFAMILY
FYVE/PHD zinc finger
600
657
IPR011011
-
Pumo11g02292
707
ProSitePatterns
Uncharacterized protein family UPF0054 signature.
179
189
IPR020549
-
Pumo11g02292
707
SMART
PHD_3
610
656
IPR001965
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pumo11g02292
Pumo-Chr11
55514064
55517476
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pumo11g02292
7
655
PHD Transcription Factor Family
AT5G22260
27.141
1.65e-83
276
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
PHD
Pumo11g02292
PHD
4.2e-09
CL0390
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pumo11g02292
K26271
-
gmx:100780558
1365.52
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Pumo11g02292
11
55514064
55517476
Pumo11g02292
11
55514064
55517476
ECH
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