Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02282 ATGTCGTCCACCACTCCGCTGAAACCCGACCAAGGCGATCCCGCGCCGGGGACACCGTCATCGCCCGCCGGCAGAGGTAGGCTCCAGAAGATTCCGCCGATTCCGATTCGACGGAGTAAGGTATCAACACACGGAGGCGATGAAGAGCAAGAGGCAGAGGAAGGTGAACGTGCTGATTCTTCTTCCATCTTGCTGGCCTCGTCTCTAGGGCTCAATCACATTCGAACGCGTTCTTCCTCTTCTCCTCTTCGCTATTCCTCCTCCGTTGGCGCACCTTCCTTCTTGACACAGGATGCTGTCACTTTTGATAACCCCAGACTTAGATCCAAACCCAATCCCCATCCCAGAAAAGACCTAGGGGGAAAAGCTCATTTGGGTCAATCCAAATCGCTGAGACCTCATTCGCAACTCATTCCTGTGCTAGAGGGTCATCATGCAGCTTTCACCAAAGAAATGCAATCCCCACGTTTTCAGGAAATCCTGCGACTTACCAGTGGACGCAAAAAGAGAAACCCTGATATTAAAAGCTTTTCCCATGAACTCAACTCCAAAGGAGTTAGACCATATCCAATCTGGAAACATCGTGCCTTTGGCCACATGGAGGAAGTCATGGCGGCAATTAGAGCTAAGTTTGAAAAATTAAAGGAAGAAGTTGATTCTGACTTGGGTGGTTTTGCTGGAGATTTGGTAGGCATTCTTGAAAAAAATTTAGTGTCTGATCGTGAATGGAAAGAGAGGTTGGAGGATCTGTTGGTTGTTACTCAACAATGTGCAAAGATGACTCCTACCCAGTTTTGGATCAAATGCGAATCTATTGTTCAAAATCTAGATGACAAACGTCAAGAATTACCAGTGGGGATACTCAAGCAAGCTCATACACGCCTACTGTTTATTCTCACTCGTTGCACACGCCTAGTGCAATTCCAGAAGGAAAGCGGATATGAACAAGATCACATTCTGGGTCTTCACCAACTCAGCGATCTTGGGGTCTATTCTGAGCAAATTTTGAAGGTTGCACAGCAGAAATCCAGTATTCCACCTGATGGACATGAGATGGCTGAGAAGCAGTTAAAAATGTCACATGGTAAAGAGAAAGACAAACTGATTACAAAGCAAAGTCAAGCTGACCAACATGTAAGTGTTGCGATTGACAATGTGGAGGTTGCTACAGACAAAAGTGTTGAATCAACTCCTGGAAGTTATAGGATGTCTTCTTGGAGAAAGCTTCCATCTGCTGCTGAGAAAAAGCGAAAAGGTCAAGATGCTGTAGATTTAGTCAAAGATGAAAATTTGGATACTTTGTCATCTCATCCTGAACATTCACAATCATCATCAAGAGCGCGAAAGGTTTCTTGGGGATTCTGGGGAGATCAGCAAAATCTAACATACGAGGATTCAATGATATGCAGGATTTGTGAGGTTGAAATACCAATTGTACATGTGGAGGAGCATTCTCGAATATGCACAATTGCTGATAGATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGAAACCATTGAAAGGATACTGGAATCCTGGACACCAAAAAGCACACCAAAAAGCACTGATACTCCTGGAGAAAGTTTCGAGCTTGCCACAGTGTCAACATCAAGTGTGCTTGAAGAGTTCAATGATTTATCTCTAGAGAGAAATAACCTGACTTGTAGATTCTCTGAAGACATGCTTGACTCTGCTCCAGAGCCTGACAATACTTTTGTCATGGAGGATCTGAACCTTTCACCCCGAATATCATGTGAAGCACGCATCTGCTTAAAACCGGATCATGGAACAAAGGTATCTTCAGCTGGAAGCTTGACACCGAGATCACCATTGGTAACACCACGAACCACACAGATAGAAGTGTTACTAAATGGACGAAGAACACTATCTGAACTTGAAAGTGGTGACCAGATAAGCAAACTAGTTGAAATAGCCCGTGCTGTTGCAAATGTGAACAACTGTGACTACAGTGCTCTGGAGTATATGCTTGATCGCTTAGAAGACCTAAAATACGCCATTCATGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGACGACGAATAGAGAAACTTTTGCAGGAGAAATATATATCTCTTTGTGGGCAGATAGAAGATGAAAAGGTGGACTCATCAAATAGCATGGCTGATGAAGAGAGTTCAGTCGAAGATGATACAGTTCGTAGCCTTCGTGCTAGCCCTATTAATGCTTGTTCCAAGGACCGAACCTCTATTGAAGACTTTGAAATAATAAAACCAATAAGTAGGGGTGCATTTGGACGAGTTTTTCTTACCCGAAAAAGAGCAACTGGTGATTTATTTGCTATAAAGGTTCTGAAAAAGGCAGATATGATTCGTAAAAATGCAGTTCAAAGTATTTTGGCAGAGCGAGACATCCTTATATCTGTTCGAAACCCTTTTGTGGTTCGATTTTTCTACTCTTTCACATGTAGGGAAAATCTTTATCTAGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCTATGTTGAGAAATCTAGGTTGCTTAGATGAAGATATGGCTCGTGTATATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTACTGATTGGTCAAGATGGTCATATTAAGTTGACAGATTTTGGGCTCTCTAAGGTTGGTCTTATCAACAGCACAGACGATTTATCAGCGCCATCATTTTCCACCAATGGTTTCCTAGGAGATGATGAACCAAAACCTCGACATTCTTCAAAAAGGGAAGAGCGTCAAAAACAATCAGTGGTTGGCACCCCGGATTATTTGGCACCTGAAATACTTCTTGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCCGTGGGTGTCATACTTTATGAGCTTCTTGTGGGTATTCCACCATTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCCAAGATTCCTGAGGAAATCAGCTTTGAAGCATATGATTTGATAAATAAATTATTGAACGAAAATCCAGTCCAAAGATTAGGTGCAACAGGAGCTACGGAAGTTAAACGCCACGCTTTCTTCAAGGATATTAATTGGGATACCCTAGCAAGGCAGAAGGCTATGTTCATTCCATCGGCTGAAGCTCTTGATACAAGTTATTTTATGAGCCGGTACATTTGGAATCCCGAGGATGAACATTGTCTTGGAGGTAGTGATTTTGATGAGATTACTGAAACATGCAGCAGTGGTTCAGGAAGCGATTTATTAGATGAAGATGGTGATGAATGTGGTAGTTTAACAGAGTTCAGTGGTCCACCTCTTGAAGTGCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTGTCTCAGCTAGCTTCTATCAATTATGATCTGGTGATTAAGAACTCCAAGGAATCAACTCAATGA 3474 0.4211 MSSTTPLKPDQGDPAPGTPSSPAGRGRLQKIPPIPIRRSKVSTHGGDEEQEAEEGERADSSSILLASSLGLNHIRTRSSSSPLRYSSSVGAPSFLTQDAVTFDNPRLRSKPNPHPRKDLGGKAHLGQSKSLRPHSQLIPVLEGHHAAFTKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVRPYPIWKHRAFGHMEEVMAAIRAKFEKLKEEVDSDLGGFAGDLVGILEKNLVSDREWKERLEDLLVVTQQCAKMTPTQFWIKCESIVQNLDDKRQELPVGILKQAHTRLLFILTRCTRLVQFQKESGYEQDHILGLHQLSDLGVYSEQILKVAQQKSSIPPDGHEMAEKQLKMSHGKEKDKLITKQSQADQHVSVAIDNVEVATDKSVESTPGSYRMSSWRKLPSAAEKKRKGQDAVDLVKDENLDTLSSHPEHSQSSSRARKVSWGFWGDQQNLTYEDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERILESWTPKSTPKSTDTPGESFELATVSTSSVLEEFNDLSLERNNLTCRFSEDMLDSAPEPDNTFVMEDLNLSPRISCEARICLKPDHGTKVSSAGSLTPRSPLVTPRTTQIEVLLNGRRTLSELESGDQISKLVEIARAVANVNNCDYSALEYMLDRLEDLKYAIHDRKVDALIVETFGRRIEKLLQEKYISLCGQIEDEKVDSSNSMADEESSVEDDTVRSLRASPINACSKDRTSIEDFEIIKPISRGAFGRVFLTRKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDEDMARVYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSTNGFLGDDEPKPRHSSKREERQKQSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKIPEEISFEAYDLINKLLNENPVQRLGATGATEVKRHAFFKDINWDTLARQKAMFIPSAEALDTSYFMSRYIWNPEDEHCLGGSDFDEITETCSSGSGSDLLDEDGDECGSLTEFSGPPLEVQYSFSNFSFKNLSQLASINYDLVIKNSKESTQ 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02282 1157 MobiDBLite consensus disorder prediction 393 449 - -
Pumo11g02282 1157 ProSiteProfiles Protein kinase domain profile. 755 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02282 1157 SMART serkin_6 755 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02282 1157 ProSiteProfiles AGC-kinase C-terminal domain profile. 1044 1144 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo11g02282 1157 Gene3D Transferase(Phosphotransferase) domain 1 839 1061 - -
Pumo11g02282 1157 MobiDBLite consensus disorder prediction 924 942 - -
Pumo11g02282 1157 MobiDBLite consensus disorder prediction 409 435 - -
Pumo11g02282 1157 CDD STKc_MAST_like 761 1048 - -
Pumo11g02282 1157 MobiDBLite consensus disorder prediction 916 943 - -
Pumo11g02282 1157 FunFam probable serine/threonine protein kinase IREH1 753 843 - -
Pumo11g02282 1157 MobiDBLite consensus disorder prediction 100 133 - -
Pumo11g02282 1157 Pfam Protein kinase domain 755 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02282 1157 PANTHER SERINE/THREONINE-PROTEIN KINASE 442 1118 - -
Pumo11g02282 1157 MobiDBLite consensus disorder prediction 109 123 - -
Pumo11g02282 1157 Gene3D Phosphorylase Kinase; domain 1 753 1070 - -
Pumo11g02282 1157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 874 886 IPR008271 GO:0004672|GO:0006468
Pumo11g02282 1157 MobiDBLite consensus disorder prediction 1 60 - -
Pumo11g02282 1157 SUPERFAMILY Protein kinase-like (PK-like) 752 1071 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02282 Pumo-Chr11 55400590 55408905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02282 28 1157 AGC Kinase Gene Family AT5G62310 64.433 0.0 1447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Pumo11g02282 Pkinase 6.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02282 - - gmx:100817975 2072.74