Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02278 ATGGCATTGCACGCTCTCATTGGAAGTTCAAGATCTTCCCAAAATCTCCTTAGAATACTTCTATCCCTTCTACTCATCTCAACCCTTCTCCAATTAGTAGCATCTGCGTCCTCCAAATCATCAACCACCACTACCGATTCCCTCAAAGCCTACAAAAAGTTCATAAAAGATAATTGCAATTCAACCACTTACCCAAAGGTTTGCTACAAGTCTCTGTCCCCTTATGCATCAAAAATCAAAAGAAACCGCGTAACACTCACCAAAGTGTCTATTTATGTGGCTCTAAAAGCAGCCAAGAGTGCAAATAGCACATTGACAAAGCTATCCAAATCCAAGGGGAAGCTAACACATGGAGAGACATCGGTCATTGCTGATTGCCAAGAGAACATTGATGACACGTTGGATCTGCTTCAGCAATCTGCTGATGGGTTGGCACATTTGAATGGCACATCTACTGCTGATGAGAAATTTCAATGGGACAACATAAAGACATGGATGAGTGCTGCCATAACAGATGAGACTACATGCACCGATGAGTTTGACGAAATACAAGTGCGTCCTTCACTGCAGAAGAAGATCAAAACCAGCGTCTATAACGTTTCTTGGTTCACTAGCAATGCCTTGGCATTCGTCAACAGGCTTTACTAA 648 0.4244 MALHALIGSSRSSQNLLRILLSLLLISTLLQLVASASSKSSTTTTDSLKAYKKFIKDNCNSTTYPKVCYKSLSPYASKIKRNRVTLTKVSIYVALKAAKSANSTLTKLSKSKGKLTHGETSVIADCQENIDDTLDLLQQSADGLAHLNGTSTADEKFQWDNIKTWMSAAITDETTCTDEFDEIQVRPSLQKKIKTSVYNVSWFTSNALAFVNRLY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02278 215 SMART PMEI_2 50 210 IPR006501 GO:0004857
Pumo11g02278 215 FunFam Pectinesterase 51 215 - -
Pumo11g02278 215 NCBIfam pectinesterase inhibitor domain 20 214 IPR006501 GO:0004857
Pumo11g02278 215 CDD PMEI-like_3 59 214 - -
Pumo11g02278 215 Pfam Plant invertase/pectin methylesterase inhibitor 53 209 IPR006501 GO:0004857
Pumo11g02278 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 214 IPR035513 -
Pumo11g02278 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 214 IPR035513 -
Pumo11g02278 215 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02278 Pumo-Chr11 55379813 55380460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02278 33 214 Carbohydrate Esterase AT3G14310 27.473 8.61e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02278 - - gmx:100527377 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02278 11 55379813 55380460 Pumo11g02278 11 55379813 55380460 ECH