Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02276 ATGGAGGCCATTTCTTCCAAGCACCTTATCACATCCCTTGTCATAATTCTTGCTTCTAGTTTCACCACAAACGCTGCCAACAAAAGCAGTGAAAGACCATACCAAGAGGCGAGCACAGTGTTCATTAGAACATCTTGTAGTTCCACAACTTATCCAAGACTCTGCTACAGCTCCTTAGTGAAGCATGCAGACTTGATCCAAACAAATCGTGTGGTTTTGACTGGCACAGCCCTGAATGTGACTCTTGCGTCAGCCAAATGGACCTCAGAAATGATGTCAACACTGGCAAAGAGACAGGGGCTGCAGCCAAGAGAGGTTGCAGCCATGAAGGACTGTGTGGAGGAGCTGGGTGACTCTGTTGATGAACTCCGAAGGTCTATTGCTGAGATGGCTCATCTAAGACCCTCCAATTTTGAGATGACAATGAATGACGTACAAACATGGGTGAGTGCTGCTTTGACGGATGAGAGCACGTGCACCGATGGCTTTCAAGAGACAGCCACTGGTGGTACAAATGTTAAGAGCACCGTGAGAGGGCAAATTGTGCAGGTGGCTCAATTGACTAGTAATGCCTTGGCTTTGATAAATCAGCTAGCCAATTCTCATGCTTAA 612 0.469 MEAISSKHLITSLVIILASSFTTNAANKSSERPYQEASTVFIRTSCSSTTYPRLCYSSLVKHADLIQTNRVVLTGTALNVTLASAKWTSEMMSTLAKRQGLQPREVAAMKDCVEELGDSVDELRRSIAEMAHLRPSNFEMTMNDVQTWVSAALTDESTCTDGFQETATGGTNVKSTVRGQIVQVAQLTSNALALINQLANSHA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02276 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Pumo11g02276 203 Pfam Plant invertase/pectin methylesterase inhibitor 41 194 IPR006501 GO:0004857
Pumo11g02276 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 194 - -
Pumo11g02276 203 SMART PMEI_2 37 194 IPR006501 GO:0004857
Pumo11g02276 203 FunFam Pectinesterase inhibitor 3 37 199 - -
Pumo11g02276 203 NCBIfam pectinesterase inhibitor domain 8 198 IPR006501 GO:0004857
Pumo11g02276 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 198 IPR035513 -
Pumo11g02276 203 CDD PMEI-like_3 44 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02276 Pumo-Chr11 55357000 55357960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02276 25 201 Carbohydrate Esterase AT3G14310 32.597 2.70e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02276 - - gmx:100305537 338.191