Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02269 ATGGACTTGAAGTCGAATCATACTCCTGTTCTCACTGATAATGCACCCATAACAAAATCTAGATTGGGTGTGCATTCCAGTTTGTTGCCTTACTCCCATACTGGGACAACCTTTACACATGGAATGTTATTGACTATCCCGAGGAAGAAGACAGGAATTCTTGAAGATTTTCGTTCTAGTGGTTGGTTGGATGCCATGAAATCATCTTCACCTCCAGCCAGGAAGATAACAAAGGATGTTAGCCATGTGTTTGCATCATCTGATTCTGATACTGCTGGTGCTTATTTTAGCTGGCTGCTAAAATACCCATCAGCACTTACATCTTTTGATAAAATCACGAACTATGCAAAAGGGAAAAGAATTGCGTTGTTTCTGGATTATGATGGAACTCTTTCACCGATTGTGGATAATCCTGACTGTGCTTTCATGTCCGACAATATGCGTGCTGCTGTTAAAAAGGTGGCAGAATATTTTCCAACAGCAATAATTAGTGGAAGAAGTCGTGACAAGGTATATCAATTTGTAGGACTAACAGAACTCTATTACGCTGGTAGTCATGGAATGGACATCATTGGCCCTGTTAGACAATCTGTATCTGATAATCACCCAAATTGCATTAGGTCTACAGACAAGCAGGGTAAGGAAGTAAATTTATTCCAACCTGCTGCTGAATTTCTGCCCATGATTAATGAGGTACTCAAGTCTCTTGAAGAGTGTACGAAAGACATTAAAGGATCTAAAGTTGAGAACAATAAATTTTGTGTATCTGTGCACTACCGGAATGTAGATGAAAAGTATTGGGGTTTGGTGGGGCAACGTGTTCATGATGTTCTGAAGGGCTATCCGCGTTTGCGCTTAACTCATGGGCGGAAGGTTTTAGAGATCCGACCTGTGATTAACTGGGATAAGGGAAAAGCTGTCACGTTTTTACTCGAGTCACTTGGACTAAACAATAGCGATGATGTGCTTCCTATATATATTGGAGATGATCGGACTGACGAAGATGCATTTAAGGTCTTGAGAGAGGGAAATAAAGGTTATGGGATCTTGGTGTCTTCGGCACCAAAAGAAAGCAACGCAGTTTACTCTCTTCGTGATCCATCAGAGCTCTTTCGATTTTGGTTTTCTCGGAAACATTCCAAGAGTTTTCCTGGAGCAGATTTGCGCACAGAAGACCTCTTATGGTTACAACAGCTCTGTCGCTACCCAGTTGTTTTCCTCAAACCTCCTGTGGTAGCTGTAAATTCGTCGCTCATAATTATAAATATCTTAAAGAATTAA 1281 0.4091 MDLKSNHTPVLTDNAPITKSRLGVHSSLLPYSHTGTTFTHGMLLTIPRKKTGILEDFRSSGWLDAMKSSSPPARKITKDVSHVFASSDSDTAGAYFSWLLKYPSALTSFDKITNYAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAEYFPTAIISGRSRDKVYQFVGLTELYYAGSHGMDIIGPVRQSVSDNHPNCIRSTDKQGKEVNLFQPAAEFLPMINEVLKSLEECTKDIKGSKVENNKFCVSVHYRNVDEKYWGLVGQRVHDVLKGYPRLRLTHGRKVLEIRPVINWDKGKAVTFLLESLGLNNSDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKESNAVYSLRDPSELFRFWFSRKHSKSFPGADLRTEDLLWLQQLCRYPVVFLKPPVVAVNSSLIIINILKN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02269 426 SUPERFAMILY HAD-like 122 374 IPR036412 -
Pumo11g02269 426 FunFam Trehalose 6-phosphate phosphatase 228 383 - -
Pumo11g02269 426 Pfam Trehalose-phosphatase 124 368 IPR003337 GO:0003824|GO:0005992
Pumo11g02269 426 CDD HAD_TPP 122 372 - -
Pumo11g02269 426 Gene3D - 121 213 IPR023214 -
Pumo11g02269 426 Gene3D - 219 382 IPR023214 -
Pumo11g02269 426 FunFam Trehalose 6-phosphate phosphatase 121 211 - -
Pumo11g02269 426 NCBIfam HAD-IIB family hydrolase 123 341 IPR006379 -
Pumo11g02269 426 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 373 IPR044651 GO:0004805|GO:0005992
Pumo11g02269 426 NCBIfam trehalose-phosphatase 118 373 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02269 Pumo-Chr11 55258926 55264629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02269 115 373 Trehalose Biosynthesis Gene Families AT1G70290 26.087 4.37e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02269 K01087 - gmx:100819495 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02269 11 55258926 55264629 Pumo11g02269 11 55258926 55264629 ECH