Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02255 ATGGGGGAATCGAGTTCTAGGGTTTCCCACACTCTTCAGCAGCCCACCGCAGGCATCGTCAAGAGACTTCGACTCGAGAACTTCATGTGCCATTCCAAGCACGAGACTGAGTTCGGAAACCACGTCAATTTCATCACCGGTCAAAACGGAAGTGGTAAGAGTGCAATCCTAACTGCACTGTGTGTTGCATTTGGCTGTCGAGCCAAAGGGACTCAAAGGGCATCCACTTTGAAGGATTTCATTAAAACTGGTGCTACTAATGCTGTCATCCAAGTTGAAATTCAAAATGAAGGAGAGGATGCTTTTAAACCTGATATATATGGTCCTGTTATCATTGTAGAACGTAGGATATCTGAATCCACAAGTTCTACTACATTAAAAGACCACCAAGGAAGGAAGGTTGTCAGTCGGAAAGCAGATCTTCTGGAAATTGTTGAACATTTTAATATTGATGTGGAGAATCCATGTGTAATTATGAGTCAAGACAAAAGCAGAGAGTTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTCTTTTACAAGGCCACACTTCTTCAGCAAGTCAATGATCTTCTGGAAAGCATTTCCAATGAAATAACTGCTGCACATGTAATAGTTGAAGAATTAGAGACTGCAATAAGGCCCATAGAGAATGAGCTTAATGAGCTGCAAGTTAAAATTAGAAATATGGAACATGTTGAACAAATATCCATACAGGTTCAGCAGTTAAAGAAGAAACTTGCATGGTCATGGGTTTATGATGTGGACAAGCAACTAGAGGAACAAAATGTAAAGATTGAAAAACTGAAGAACCGGATACCTACCTGCCAGGCTAAGATTGATCAACAACTGCATTTAGTTGAAAAGTTGATGGAAAGCTGCTCCAAGAAAAAAGATGAAATTAAAAGTATGTTGAATAAGACATCACAAGTTAAGCAAATGAAGGAAAATTTAAACCAATCTGTGTCCATGGCAAAGAAAGAGGCACTTGAACTTGAGCGAGACTGCAAATGCAAAACTAGCAACATACAGAAGTTGGTACAGCAACTTGAAATGCTTGAACGACAAGTGCAGGATATTCGTGAGCAGCACGAAAAAAATACTCAGGCTGAAGAATCTAACATGGAGGAGAAACTGAAGGGGCTTAAAGATGAGGTTCATGCAGCTGAGTCAAAGCTGAAGAGATTGAAAGAAGAAGAGGCTTCATTAATGGATAGCATACATAGGCAAAAGGATGAAATCCGAAAGATAGCTGATAAGATCCATGACCATGAAAAAATTCATCGTGATAACATGTGTCAAATCCATGATCTTCAACAACATAAAGGCAATAAGATTACTGTTTTTGGAGGAGATAGAGTGATAAGTTTGTTACGTATAATTGAGAAATACCACCAAAGGTTTAAGATGCCTCCAATTGGTCCAATTGGTGCCCATCTGAAGCTTCTTCATGGTAATAAATGGGCACTTGCCATTGAATATGCTATTGGGAGATTGCTCAATTCTTTTATAGTGACTGATCATGCGGATTGTCGTCTTCTGAAACAATGTGCGAAGGAAGCAAACTATGGGCACCTTCAAATTATTGTTTATGATTTTTCAATCCCAAGGTTGAAGATACCACAACACATGCTTCCTGATACAGAACATCCATCAATTCTTTCTGTCTTACAATGCGAGAATCACACTGTGATTAATGTCTTAGTGGATCAGGGAAATGTTGAGAGACAAGTGCTTGTTAAGGATTATGACGCTGGGAAAGTGGCTGCCTTTGAGCGAAGGATCCGAAATTTGAAGGAGGTCTATGTAGCAGATGGATGTAGAATGTTTTCTCGAGGTCCAGTGGAGACTGTTATTCAGCCAAATTATAAGAGGCAAAGAACTGGCCGTCTTTGTGGTTCTTTTGAAGATGAGATTGAGAAACTTCGTGCTGAAGCATCTGATGAACAAAAGGCAGTTGATGGCTGTAAACACATTAAAAGAAAGGCAGAGATCAAGCTTGAGGAGCTTGACAAGAATATGAATTCTATAAAGAGGCTTTGTGTAGATGCAGATAAAAGTTTAACTTCTAAGAAGCTAGCGTTGGAGCAGGAAATGACAATGCACACTGCTGGAAATAGCGCAACACCTTTGTCCTCTGTTGATGAGCTCATTGAAGAAATTTCAGAGATCAAGAAAAAAATAGAAGAAGAGCAAGTCTTGTTGGAAGGCCTTCAGCAAAAGGGGTGTGAAGCAGCAGGCAAAGCAGATGATCTTAAAGTAAAATTTGACACACTGTGTGAATCAGCGAATGGTGAAATTGCTGCCTATGAGAAAGCTGAGAATGAACTTGTAGAAATTGAAAAAGAAATGGGTTCGGCAAAAAAGGCAAAGGATCATTATGAGGGTGTCATGAAAAACAAGGTCCTATTTGATATTAAGGAGGCAGAGGAACACTATCTGGAGCTTACAAAGATGCGCGAGGAAAGTGTTGAAAAGGCTTCCATTATTTGCTCTCAGGATGAACTTGATTCATTAAGAGGTTGTGATGGGAATACCCCTGAGCAAATAAGTGCACAATTAGAAAGACTAAATCAGACACTTAGGCGTGAGAGCCAAAGGTACTCTGAATCAATCGATGATCTCAGGATGCTGTATAAGAAAAAAGAGCGTAAGATTATAAAAAGGCAGCAAGTTTACAAAACTCTTCGACAGAAATTGGATGCTTGCCAGAGAGCCTTAGAGTTAAGAAAGAGAAAGTTTCAGAGAAATGCGACTTATCTGAAGCACCAGCTTTCTTGGAAATTTAATGGCCATTTGAGGAAGAAGGGGATTAGTGGACTTATCAAAGTTAATTATGAAGAGAAAACCTTAATGATTGAGGTACAAATGCCGCAAGATGCATCAAACAGAGCTGTTCGAGACACTAGGGGGCTTTCAGGTGGGGAACGTTCTTTTTCAACATTGTGCTTTGCGTTGGCGCTTCATGAAATGACAGAGGCCCCTTTTAGAGCAATGGATGAATTTGATGTCTTCATGGATGCAGTAAGCCGAAAAATCAGCTTGGACACCCTAGTTGATTTTGCTGAGGCACATGGATCACAGTGGATATTCATCACTCCGCATGATACTAGCTCGGTGAGGTCAGGGGACAGGATAAAGAAGATGCAAATGGCCGCTCCACGTTCTTGA 3174 0.4008 MGESSSRVSHTLQQPTAGIVKRLRLENFMCHSKHETEFGNHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGATNAVIQVEIQNEGEDAFKPDIYGPVIIVERRISESTSSTTLKDHQGRKVVSRKADLLEIVEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVNDLLESISNEITAAHVIVEELETAIRPIENELNELQVKIRNMEHVEQISIQVQQLKKKLAWSWVYDVDKQLEEQNVKIEKLKNRIPTCQAKIDQQLHLVEKLMESCSKKKDEIKSMLNKTSQVKQMKENLNQSVSMAKKEALELERDCKCKTSNIQKLVQQLEMLERQVQDIREQHEKNTQAEESNMEEKLKGLKDEVHAAESKLKRLKEEEASLMDSIHRQKDEIRKIADKIHDHEKIHRDNMCQIHDLQQHKGNKITVFGGDRVISLLRIIEKYHQRFKMPPIGPIGAHLKLLHGNKWALAIEYAIGRLLNSFIVTDHADCRLLKQCAKEANYGHLQIIVYDFSIPRLKIPQHMLPDTEHPSILSVLQCENHTVINVLVDQGNVERQVLVKDYDAGKVAAFERRIRNLKEVYVADGCRMFSRGPVETVIQPNYKRQRTGRLCGSFEDEIEKLRAEASDEQKAVDGCKHIKRKAEIKLEELDKNMNSIKRLCVDADKSLTSKKLALEQEMTMHTAGNSATPLSSVDELIEEISEIKKKIEEEQVLLEGLQQKGCEAAGKADDLKVKFDTLCESANGEIAAYEKAENELVEIEKEMGSAKKAKDHYEGVMKNKVLFDIKEAEEHYLELTKMREESVEKASIICSQDELDSLRGCDGNTPEQISAQLERLNQTLRRESQRYSESIDDLRMLYKKKERKIIKRQQVYKTLRQKLDACQRALELRKRKFQRNATYLKHQLSWKFNGHLRKKGISGLIKVNYEEKTLMIEVQMPQDASNRAVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAHGSQWIFITPHDTSSVRSGDRIKKMQMAAPRS 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02255 1057 Coils Coil 764 791 - -
Pumo11g02255 1057 MobiDBLite consensus disorder prediction 363 384 - -
Pumo11g02255 1057 Coils Coil 253 280 - -
Pumo11g02255 1057 SUPERFAMILY Smc hinge domain 414 593 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Pumo11g02255 1057 Coils Coil 633 653 - -
Pumo11g02255 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 1050 IPR027417 -
Pumo11g02255 1057 Coils Coil 661 681 - -
Pumo11g02255 1057 Coils Coil 712 742 - -
Pumo11g02255 1057 Coils Coil 807 827 - -
Pumo11g02255 1057 Coils Coil 288 308 - -
Pumo11g02255 1057 Pfam RecF/RecN/SMC N terminal domain 20 1052 IPR003395 -
Pumo11g02255 1057 Coils Coil 207 234 - -
Pumo11g02255 1057 Coils Coil 852 875 - -
Pumo11g02255 1057 Gene3D - 19 224 IPR027417 -
Pumo11g02255 1057 Coils Coil 316 414 - -
Pumo11g02255 1057 Gene3D - 732 1054 IPR027417 -
Pumo11g02255 1057 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 5 1056 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02255 Pumo-Chr11 55113056 55133115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02255 1 1057 Structural Maintenance of Chromosomes family AT5G61460 58.451 0.0 1199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02255 K22804 - gmx:100816916 1839.31