Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02250 ATGACCAACCGTACATGTTATCCCTGCCTTGCAATTGCAATCCCAGCTACGTTGGTGCTTTTGCTGGCTCTTTGTCAAGGCACTTCTGGCCAAACACAAGCTGAGGCTCTCCTCAGGTGGAAACAAAGTCTCCCTGACCAATCCATTTTGGACTCATGGGTCATCAACTCCACTGCAACAGCTCAAAGTCCATGTTCATGGCGAGGTATTACTTGTGATTCTCAAGGCACTGTGACAATTATAAACTTGGCTTACACTGGACTTGCAGGTACCCTTCTAAACTTGAACTTTTCTGTTTTCCCTAACCTTCTTCGTCTTGATCTCAAAGAAAACAATCTCACTGGCCACATACCACAAAACATTGGGGTGCTCTCAAAGCTCCAATTCCTTGATCTTTCCACCAACTTTCTCAATGGCACTCTGCCTCTTTCCATTGCCAATCTGACTCGAGTTTATGAGCTTGATGTTTCAAGAAATGATATAACAGGGATATTAGACCCTCGGTTATTTCCTGATAGTTCTGATCGGCCCAAAAGTGGCCTCATTGGTATCAGAAATCTCCTCTTCCAGGACACCCTGCTAGGTGGCAGGATTCCAAATGAAATAGGGAACATTAGAAACTTGACTCTGCTAGCTCTAGATGGAAACAACTTCTATGGGCCTATTCCTTCTTCTCTAGGCAATTGCACACATTTAAGCATTCTTAGAATGCCTCAAAACCAACTCTCAGGCCCAATACCCCCTAGTATTGGTAAATTAACCAATCTAACCGATGTGCGCCTTTTCACCAACTACTTAAATGGTACAGTGCCACAAGAATTTGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCTGAGAACAACTTCGTTGGTGAATTACCACCACAAGTGTGCAAAAGTGGCAAACTTGTAAATTTTAGTGCAGCCTACAATAGTTTCACTGGCCCAATTCCAATAAGCCTTAGAAACTGCCCAGCCTTGTACAGAGTTAGACTTGAATACAACCGGCTGTCAGGTTATGCAGATCAGGATTTTGGAGTGTATCCTAACCTCACTTACATGGACTTCAGCTATAACAGGGTGGAAGGTGACCTCTCTGCAAATTGGGGTGCTTGCAAAAACTTGCAATATCTCAACATGGCTGGGAATGGAGTAAGTGGCAACATTCCAGGTGAGATTTTTCAGTTGGACCAACTGCAAGAGATTGACTTATCCTCCAACCAAATATCAGGAGAGATTCCTCCGCAGATAGTAAATTCCTCTAACTTGTATGAATTAAATTTGAGTGACAACAAACTCTCTGGCATGGTACCAGCAGAAATTGGAAAGATTTCCAATTTGCAGTCCTTAGACCTCTCTATGAACATGCTGTTGGGACCAATCCCCAATCAGATAGGGGACATCTCCAACTTGCAGAATTTAAATCTGAGCAACAATAACTTCAATGGCACAATCCCTTTCCAAGTTGGAAACCTTGCATCTTTACAAGATTTTTTGGACTTGAGTTTCAATTCACTTTCAGGACAAATTCCTTCAGATCTTGGGAAGCTTTCAAATTTGATAAGCTTGAATATCTCTCACAACAACCTGTCAGGTTCTATCCCTGACTCCCTTAGTAAAATGGTGAGTTTGTCAGCCATCAACCTCTCCTACAATAATTTGGAGGGTCCAGTTCCAGAAGGTGGCATATTCAATTCTTCTCATCCCCTGGATTTGAGTAAGAACAAAGATTTATGCGGGAAAATTCAAGGTTTGCGTCCTTGTAATGTCTCTCTCACTAAACCTGGTGGTGGATCAAGTAACAAAAAGAAGGTTGTGATCCCTATTGTTGCTTCCTTGGGGGGTGCTCTTTTTATTTCATTGGTGTGTGTTGGGATTGTTTTCTTTTGCTACAAGAGAAAGTCAAGAACTCGAAGACAAAAAAGTTCAATTAAAAGACCAAATCCATTTTCAATTTGGTACTTTAATGGCAGAGTTGTGTATGGAGACATAATCGAAGCTACCAAGAACTTTGACAACCAGTATTGCATTGGGGAAGGAGCATTGGGAATAGTTTATAAAGCAGAGATGAAAGGAGGTCAAGTATTTGCTGTAAAAAAGTTGAAGTGTGATGAAGAAAACTTAGACGTTGAAAGTATAAAAAGCTTTCAGAATGAGGTAGAAGCCATGTCTGAAACACGCCACCGAAACATTGTCAGGCTTTACGGATTTTGCTCTGAAGGGATGCACACATTTTTAATTTATGAGTATATGGATAGAGGGAACTTAGCTGACATGCTGAGAGATGACAAGGATGCATTAGAACTAGATTGGCCTAAGAGGGTTGACATTGTCAAAGGTGTAGCAAATGCTTTGTCCTATATGCATCATGATTGTGCTCCACCTTTAATTCATAGAGACATATCAAGCAAGAACATTTTACTGTCCTCCAATCTTGAAGCTCATGTCTCAGATTTTGGAACTGCTAGGTTTCTGAAGCCTGATTCGCCTATTTGGACATCATTTGCCGGCACATATGGCTATGCTGCTCCAGAGCTTGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGCGTTTTGGTTTTTGAGGTTCTTACAGGAAAACACCCGGGTGACCTTGTTTCCTACGTACAAACTTCTAGTGAACAGAAAATAAACTTCAAAGAGATTTTAGACCCTCGCCTCTTGCATCCTGCCAAGAACAATGTTTTGAAGGAATTGGCATTGATTGCCAACCTAGCTCTTTCATGTTTACAAACCAACCCTCAAGAGTATTTATATTATATTGTTGGAGTGGTCAAATGTAATTATTCTAAAACAAATAAGCAGTTTCTGAACATTACAATGGCCAACCATACTTGTTATGCCTGCCTTGCAATTCCAGCTACGCTGGTGCTTTTGCTGGCTCTTTGTGAAGGCATTTCAGCGCTAACACAAGCTGAGGCCCTTCTCAGGTGGAAACAAAGTCTCCCTCACCAAACCATTTTGGACTCATGGGTCATCAACTCCACTACAACAACTCATAGCCCATGTTCATGGCGAGGTATTACCTGTGACTCTCAACGCAGTGTGACTATAATAAACTTGTCTTACACTGGACTTGCAGGTACCCTTCTAAACTTGAACTTGTCCGTTTTCCCTAACCTTCTCCGTCTTGATCTCAAAGAAAACAATCTCACTGGCCACATACCACAAAACATTGGGGTGCTCTCTAAGCTCCAATTCCTTGACCTTTCCTCTAATAATCTCAATGGCACTCTGCCTCTTTCCATTGCCAATCTAACTCAAGTTTACGAGCTTGATGTTTCAAGAAATAAGGTAACAGGGATATTAGACCCTCGATTATTTCCTGATAGTTCTGATCGGCCCAAAAGTGGCCTCATTGGTATCAGGAATCTCCTCTTCCAGGACACCCTGTTAGGTGGCAGAATCCCAAATGAAATAGGGAACATAAGAAACTTGACTCTGCTAGCTCTAGATGGAAACAACTTCTATGGGCCTATTCCTTCATCTCTAGGCAACTGCACACATTTAAGCATTCTTAGAATGCCTCAAAACCAACTCACAGGACCAATACCCCCAAGTATTGGTAAATTAACCAATCTAACCGATGTGCGCCTTTTCACCAACTACTTAAATGGTACGGTGCCACAAGAATTTGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCTGAGAACAACTTTGTTGGTGAATTACCACCACAAGTGTGCAAAAGTGGCAAACTTGTAAATTTTAGTGCAGCCCACAATAGTTTCACTGGCCCAATTCCAATAAGCCTTAGAAACTGCCCAGCTTTGTACAGAGTTCGACTTGAATACAACCAGCTGACAGGTTATGCAGATCAGGATTTTGGAGTGTATCCTAACCTCACTTACATGGACTTCAGCTATAACAGGGTGAAAGGTGAGCTCTCTGCAAATTGGGGTGCCTGCAAAAACTTGGAATATCTCAACATGGCTGGAAATGGAGTAAGTGGCAACATTCCAGGTGAGATTTTTCAGTTGGACCAATTACAAGAGCTTGATCTATCCTCCAACCAAATATCAGGAGAGATTCCTCCACAGATAGGAAACTCCTCCAACTTGTATAAATTGGATTTGAGTGACAACAAACTCTCTGGTATGATACCAGCAGAAATTGGAAAGCTTTCCAATTTGCAGTCCTTAGACCTGTCCATGAACATGCTGTTGGGACCAATCCCAAATCAGATAGGGGACATCTCCAACTTGCTGAATTTAAATCTGAGCAACAACGACTTGAATGGCACAATTCCCTACCAAATTGGAAACCTTGCAGATTTACAATATTTTTTGGACTTGAGTTACAATTCACTTTCAGGAGAAATTCCTGCTGATCTTGGGAAGCTTTCAAATTTGATGAGCTTGAATATCTCTCACAACAATCTGTCAGGTTCTATCCCTCACTCCCTTGGTGAAATGTTGAGTTTGTTAGCCATCAACCTCTCCTACAATAATTTGGAGGGTGCTTTTTTTATTTCTTTGGTGTTACTTGGGATTGTTTTCTTTTGCTATAAGAGAAAATCAAGAGCTCCAAGACAAAAAAAATCATTCAGAAGACCGAATCCATTTTCAATTTGGTACTTCAATGGGAGAGTTGTGTATAGAGACATAATCGAAGCTACCAAGAACTTTGACAACCAGTGTTGCATTGGGGAAGGAGCACTGGGAAAAGTTTATAAAGCAGAGATGTCAGGAGGTCAAGTATTTGCTGTAAAAAAGTTGAAGTGTGATTCAGACAGCATAGACGTTGAGAGTATAAAATCCTTTCAGAATGAGGTAGAAGCCATGACAGAAACACGCCACCGAAACATTGTCAAGCTTTATGGATTTTGCTCTGAAGGGATGCACACTTTTTTAATTTATGAGTATATGGATAGAGGGAATTTAGCTGACATGCTGAGAGATGACAAGGTTGCATTAGAACTGGATTGGCACAAGAGGGTTGATATTGTCAAAGGTGTAGCAAGCGCTTTGTCCTATATGCATCATGATTGTGCTCCACCTTTAATTCATAGAGACATATCAAGCAAAAACGTTTTGCTGTCCTCCAATCTTCAAGCTCATGTCTCAGATTTTGGAACTGCTAGATTTCTGAAGCCTGATTCTGCTATTTGGACATCATTTGCCGGCACATATGGCTATGCTGCTCCAGAGCTTGCTTACACAATGGAAGTGAGCGAGAAATGTGATGTGTTCAGCTTTGGCGTTTTGGCTTTGGAGGTTCTTACGGGAAAGCACCCCGGTGACATTGTTTCATCCATTCAAACTTCAAGTGAACAAAAAGTAAACATCAAAGAGATTTTAGACCCTCGCCTCTCCCCTCCTGCCAAGAGCCATATCTTGAAGGAAGTGGATTTGGTTGCCAACGTAGCTCTTTCATGTTTAATGACAAACCCTCAGTCTCGACCAACTATGCGAAACATAGCTCAACTGCTTGAAATGGAGACTGCAGACATCATATAA 5523 0.4154 MTNRTCYPCLAIAIPATLVLLLALCQGTSGQTQAEALLRWKQSLPDQSILDSWVINSTATAQSPCSWRGITCDSQGTVTIINLAYTGLAGTLLNLNFSVFPNLLRLDLKENNLTGHIPQNIGVLSKLQFLDLSTNFLNGTLPLSIANLTRVYELDVSRNDITGILDPRLFPDSSDRPKSGLIGIRNLLFQDTLLGGRIPNEIGNIRNLTLLALDGNNFYGPIPSSLGNCTHLSILRMPQNQLSGPIPPSIGKLTNLTDVRLFTNYLNGTVPQEFGNLSSLIVLHLAENNFVGELPPQVCKSGKLVNFSAAYNSFTGPIPISLRNCPALYRVRLEYNRLSGYADQDFGVYPNLTYMDFSYNRVEGDLSANWGACKNLQYLNMAGNGVSGNIPGEIFQLDQLQEIDLSSNQISGEIPPQIVNSSNLYELNLSDNKLSGMVPAEIGKISNLQSLDLSMNMLLGPIPNQIGDISNLQNLNLSNNNFNGTIPFQVGNLASLQDFLDLSFNSLSGQIPSDLGKLSNLISLNISHNNLSGSIPDSLSKMVSLSAINLSYNNLEGPVPEGGIFNSSHPLDLSKNKDLCGKIQGLRPCNVSLTKPGGGSSNKKKVVIPIVASLGGALFISLVCVGIVFFCYKRKSRTRRQKSSIKRPNPFSIWYFNGRVVYGDIIEATKNFDNQYCIGEGALGIVYKAEMKGGQVFAVKKLKCDEENLDVESIKSFQNEVEAMSETRHRNIVRLYGFCSEGMHTFLIYEYMDRGNLADMLRDDKDALELDWPKRVDIVKGVANALSYMHHDCAPPLIHRDISSKNILLSSNLEAHVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLVFEVLTGKHPGDLVSYVQTSSEQKINFKEILDPRLLHPAKNNVLKELALIANLALSCLQTNPQEYLYYIVGVVKCNYSKTNKQFLNITMANHTCYACLAIPATLVLLLALCEGISALTQAEALLRWKQSLPHQTILDSWVINSTTTTHSPCSWRGITCDSQRSVTIINLSYTGLAGTLLNLNLSVFPNLLRLDLKENNLTGHIPQNIGVLSKLQFLDLSSNNLNGTLPLSIANLTQVYELDVSRNKVTGILDPRLFPDSSDRPKSGLIGIRNLLFQDTLLGGRIPNEIGNIRNLTLLALDGNNFYGPIPSSLGNCTHLSILRMPQNQLTGPIPPSIGKLTNLTDVRLFTNYLNGTVPQEFGNLSSLIVLHLAENNFVGELPPQVCKSGKLVNFSAAHNSFTGPIPISLRNCPALYRVRLEYNQLTGYADQDFGVYPNLTYMDFSYNRVKGELSANWGACKNLEYLNMAGNGVSGNIPGEIFQLDQLQELDLSSNQISGEIPPQIGNSSNLYKLDLSDNKLSGMIPAEIGKLSNLQSLDLSMNMLLGPIPNQIGDISNLLNLNLSNNDLNGTIPYQIGNLADLQYFLDLSYNSLSGEIPADLGKLSNLMSLNISHNNLSGSIPHSLGEMLSLLAINLSYNNLEGAFFISLVLLGIVFFCYKRKSRAPRQKKSFRRPNPFSIWYFNGRVVYRDIIEATKNFDNQCCIGEGALGKVYKAEMSGGQVFAVKKLKCDSDSIDVESIKSFQNEVEAMTETRHRNIVKLYGFCSEGMHTFLIYEYMDRGNLADMLRDDKVALELDWHKRVDIVKGVASALSYMHHDCAPPLIHRDISSKNVLLSSNLQAHVSDFGTARFLKPDSAIWTSFAGTYGYAAPELAYTMEVSEKCDVFSFGVLALEVLTGKHPGDIVSSIQTSSEQKVNIKEILDPRLSPPAKSHILKEVDLVANVALSCLMTNPQSRPTMRNIAQLLEMETADII 1840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02250 1840 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1689 1701 IPR008266 GO:0004672|GO:0006468
Pumo11g02250 1840 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Pumo11g02250 1840 Pfam Leucine rich repeat N-terminal domain 983 1024 IPR013210 -
Pumo11g02250 1840 SMART serkin_6 672 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02250 1840 SMART serkin_6 1564 1837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02250 1840 Gene3D Phosphorylase Kinase; domain 1 632 751 - -
Pumo11g02250 1840 Gene3D Phosphorylase Kinase; domain 1 1527 1643 - -
Pumo11g02250 1840 Gene3D Ribonuclease Inhibitor 980 1060 IPR032675 -
Pumo11g02250 1840 FunFam Predicted protein 1128 1216 - -
Pumo11g02250 1840 SUPERFAMILY L domain-like 52 364 - -
Pumo11g02250 1840 FunFam Nuclear pore complex protein NUP107 30 171 - -
Pumo11g02250 1840 Gene3D Transferase(Phosphotransferase) domain 1 1644 1838 - -
Pumo11g02250 1840 Gene3D Transferase(Phosphotransferase) domain 1 752 938 - -
Pumo11g02250 1840 Pfam Protein kinase domain 1569 1830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02250 1840 Pfam Protein kinase domain 677 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02250 1840 Gene3D Ribonuclease Inhibitor 1126 1338 IPR032675 -
Pumo11g02250 1840 Gene3D Ribonuclease Inhibitor 1339 1436 IPR032675 -
Pumo11g02250 1840 SMART LRR_sd22_2 1075 1101 - -
Pumo11g02250 1840 SMART LRR_sd22_2 1348 1374 - -
Pumo11g02250 1840 SMART LRR_sd22_2 397 423 - -
Pumo11g02250 1840 SMART LRR_sd22_2 124 150 - -
Pumo11g02250 1840 SMART LRR_sd22_2 445 477 - -
Pumo11g02250 1840 SMART LRR_sd22_2 1396 1422 - -
Pumo11g02250 1840 FunFam MDIS1-interacting receptor like kinase 2 1644 1838 - -
Pumo11g02250 1840 FunFam Leucine-rich repeat receptor-like protein kinase TDR 274 591 - -
Pumo11g02250 1840 Gene3D Ribonuclease Inhibitor 174 263 IPR032675 -
Pumo11g02250 1840 Gene3D Ribonuclease Inhibitor 1437 1517 IPR032675 -
Pumo11g02250 1840 FunFam Nuclear pore complex protein NUP107 981 1122 - -
Pumo11g02250 1840 SMART LRR_typ_2 397 421 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 1099 1123 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 277 301 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 1348 1372 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 148 172 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 518 542 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 1228 1252 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 1396 1420 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 1469 1493 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 100 124 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 469 493 IPR003591 -
Pumo11g02250 1840 SMART LRR_typ_2 1075 1098 IPR003591 -
Pumo11g02250 1840 FunFam Leucine-rich repeat receptor protein kinase MSP1 1526 1643 - -
Pumo11g02250 1840 PRINTS Leucine-rich repeat signature 1396 1409 - -
Pumo11g02250 1840 PRINTS Leucine-rich repeat signature 1078 1091 - -
Pumo11g02250 1840 SUPERFAMILY Protein kinase-like (PK-like) 645 929 IPR011009 -
Pumo11g02250 1840 ProSiteProfiles Leucine-rich repeat profile. 1350 1372 IPR001611 GO:0005515
Pumo11g02250 1840 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 1229 1514 - -
Pumo11g02250 1840 SUPERFAMILY RNI-like 263 561 - -
Pumo11g02250 1840 FunFam Leucine-rich repeat receptor protein kinase MSP1 634 751 - -
Pumo11g02250 1840 Gene3D Ribonuclease Inhibitor 30 173 IPR032675 -
Pumo11g02250 1840 SUPERFAMILY RNI-like 1196 1515 - -
Pumo11g02250 1840 FunFam MDIS1-interacting receptor like kinase 2 752 932 - -
Pumo11g02250 1840 Gene3D Ribonuclease Inhibitor 264 591 IPR032675 -
Pumo11g02250 1840 FunFam Predicted protein 177 265 - -
Pumo11g02250 1840 ProSitePatterns Tyrosine protein kinases specific active-site signature. 797 809 IPR008266 GO:0004672|GO:0006468
Pumo11g02250 1840 Pfam Leucine rich repeat 399 458 IPR001611 GO:0005515
Pumo11g02250 1840 Pfam Leucine rich repeat 1350 1409 IPR001611 GO:0005515
Pumo11g02250 1840 Pfam Leucine rich repeat 500 555 IPR001611 GO:0005515
Pumo11g02250 1840 Gene3D Ribonuclease Inhibitor 1061 1125 IPR032675 -
Pumo11g02250 1840 PANTHER LEUCINE RICH REPEAT KINASE 2 226 929 - -
Pumo11g02250 1840 SUPERFAMILY Protein kinase-like (PK-like) 1538 1834 IPR011009 -
Pumo11g02250 1840 ProSiteProfiles Protein kinase domain profile. 672 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02250 1840 ProSiteProfiles Protein kinase domain profile. 1564 1837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g02250 1840 SUPERFAMILY RNI-like 1020 1246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02250 Pumo-Chr11 55042939 55064328 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02250 33 845 Receptor kinase-like Gene Family AT4G08850 39.604 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo11g02250 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02250 - - aprc:113866080 2128.6