Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02235 ATGCAATCAAAATTTTGTAGAATGGCGGAAGCTCAAGAGTCTCAAACCCAATCATCACTCGGTCAAGAAGATGAAAATGAAGTGATTACTGAAAGTTCAGCATTTGTTAAAGGGGAACCTGCACCAGAATTCAGTAGTAACCCCCCAAAAGTTGATTCTGAAGTTGAGGTCCTTCATGAGAAGGTCAGCAAACAAATCATTAAGGAAGGCCATGGCCAGAAACCTTCCAAATATTCAACTTGCTTCTTCCATTACAGGGCGTGGGCTGAGAAAGCAGAACACAAGTTTGAAGATACATGGCAGGAGCAACGGCCAATTGAGATGGTCTTAGGAAAAGAGAAGAAAGAAATGACTGGGTTGGGCATTGGTGTGGCAAGCATGAAAGCTGGGGAGCGTGCATTGGTGCGTGTGGGCTGGGAATTAGGATATGGAGAGGAAGGAAGCTTCTCTTTTCCAAATGTTCCACCCAAGGCAGATTTAGTTTATGAAGTTGAGTTCATTGGCTTTGATGAAACAAAAGAAGGGAAAGCTCGCAGTGATATGACTGTGGAAGAAAGGATTGGTGCAGCAGACCGAAGAAAGATGGATGGAAATGCTTTGTATCAAGAAGAAAAACTAGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGATTTCATGTTCCAGTTGTTTGGGAAGTATAGAGATATGGCTCTGGCTGTAAAAAATCCATGCCATCTTAACATGGCAGCCTGTTTGATTAAGCTGAACCGCTATGAAGAAGCCATAGGACAATGCAGCATTGTACTGGGTGAGGATGAGAACAATGTGAAGGCATTATTTAGGCGAGGTAAGGCTAGAGCAGCACTTGGGCAAACAGATGCTGCCAGGGAAGATTTTCTAAAGGCACGTAAATATGCCCCACAAGATAAAGCAATTGCTAGAGAATTGAGATTGCTTGCTGAACATGACAAGGCTGTTTACCAAAAGCAGAAAGAGATATATAAAGGAATATTTGGACCAAGACCTGAACCAGTACCTGAGTCAAGAAATTGGCTCATACTTATTTGGCAGTGGTTGCTTTCACTATTCTATGGCCTTGTCACGCTCTTCAAGCGTGAAAGGCATAAATCTGACTAA 1134 0.4277 MQSKFCRMAEAQESQTQSSLGQEDENEVITESSAFVKGEPAPEFSSNPPKVDSEVEVLHEKVSKQIIKEGHGQKPSKYSTCFFHYRAWAEKAEHKFEDTWQEQRPIEMVLGKEKKEMTGLGIGVASMKAGERALVRVGWELGYGEEGSFSFPNVPPKADLVYEVEFIGFDETKEGKARSDMTVEERIGAADRRKMDGNALYQEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCSIVLGEDENNVKALFRRGKARAALGQTDAAREDFLKARKYAPQDKAIARELRLLAEHDKAVYQKQKEIYKGIFGPRPEPVPESRNWLILIWQWLLSLFYGLVTLFKRERHKSD 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02235 377 MobiDBLite consensus disorder prediction 1 52 - -
Pumo11g02235 377 SUPERFAMILY FKBP-like 53 169 - -
Pumo11g02235 377 FunFam Peptidylprolyl isomerase 175 303 - -
Pumo11g02235 377 SUPERFAMILY TPR-like 182 332 IPR011990 GO:0005515
Pumo11g02235 377 Pfam Tetratricopeptide repeat 276 308 IPR019734 GO:0005515
Pumo11g02235 377 MobiDBLite consensus disorder prediction 1 29 - -
Pumo11g02235 377 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 105 344 IPR039663 -
Pumo11g02235 377 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 78 170 IPR001179 GO:0003755
Pumo11g02235 377 Gene3D - 46 171 IPR046357 GO:0003755
Pumo11g02235 377 SMART tpr_5 190 223 IPR019734 GO:0005515
Pumo11g02235 377 SMART tpr_5 241 274 IPR019734 GO:0005515
Pumo11g02235 377 SMART tpr_5 275 308 IPR019734 GO:0005515
Pumo11g02235 377 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 74 167 IPR001179 GO:0003755
Pumo11g02235 377 ProSiteProfiles TPR repeat profile. 275 308 IPR019734 GO:0005515
Pumo11g02235 377 Gene3D Tetratricopeptide repeat domain 172 303 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02235 55 343 Calmodulin-binding Proteins AT5G48570 32.095 1.79e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02235 - - gmx:100790587 714.916