Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02216 ATGGGCAAAGCAAGTAGTACTTGTATTCTTCTATTCTTTCTTATTCTTTCACTCTTTGTGGCTGAAATCTATGGAAATAGACAAGTTCAAGCTCTTAACAAACTGCACAAGTCCAAGTCCAGAGGAATTTCACAAATTGATAGGGGTGAGTTTGAGGTAGAGGAGGTTGTTTATGATGGCATTGTTCATTCTCAAGAGGGTCTCAAAGAGAAAGATAGAATTGAAAGGCTTCCAGGACAACCCCTAGTGAGTTTTTCTCAGTATGGAGGGTATGTCACTGTGGATAAAGTGGCTGGTCGTGCCTTCTATTATTACTTTGTTGAAGCTCAACGTTCTAAACAAACACTCCCACTTCTTCTTTGGCTCAATGGAGGTCCTGGATGTTCATCTCTTGCCTATGGAGCAATGCAAGAACTTGGACCTTTTCGAGTAAACAGTGACGGCAAAACACTATATAGAAATATATTTTCATGGAACAAAGTTGCAAATGTTTTATTCCTGGAGTCACCTGCTGGAGTAGGATTTTCCTATTCAAACAAATCAAAAGATTATGATACCAATGGAGATAAGAAAACAGCTGCAGACAATTATTTATTCTTGGTGAATTGGTTGGAGAGATTTCCAGAGTATAAGGACAGAGATTTCTATATTGCTGGGGAAAGCTATGCTGGGCATTATGTGCCACAACTTGCACATACCATTCTCTATCATAACAAAAAGGCAAATAAAAAAATCATCAACCTCAAAGGAATCTTGATTGGGAATGCAGTGATCAACGATGAAACTGACTTGCTAGGAATGTATGATTATCTTGCTAGCCATGCAATCATCTCAGACAAAGCAGCTTATGAAATCAACCATGCTTGTGATTTCTCATCAGATAATCTGACAAGTGGGTGCGAAGCAGCCGAAGATGAAATTGAGAAGAACATTGAATACATTGATTTATATAATATTTATGCTCCAGTATGCAAGAATACCAATCTCACGGCCCTGCCCAAAAGGAACTCTATTGTGACTGATCCATGTAGTGAGTATTATGTGTATGCATATCTTAATAGAAAAGATGTTCAAGAGGCTCTCCATGCCAATGTCACCAACCTCAAATATGACTGGGAACCCTGCAGCGATGTCATTACAAAGTGGGTTGATCAAGCTGAAACAGTTCTTCCACTTTTACATGAATTCCTCAACAATAGCCTCAGGGTTTGGATTCTCAGTGGTGACACAGATGGAAGGGTGCCTGTTACTTCAACCAAGTATTCGGTTAAGAAGCTGAACCTTCCCATTGAAACTGTTTGGCACCCTTGGTTTTCCTATGGAGAGGTTGGTGGCTATGCAGAAGTATACAAGGGAGGCCTAACATTAGCTACGGTGAGGGAAGCAGGGCATCAAGTGCCAAGTTACCAACCAGCAAGGGCCCTAACTTTGATCAAATATTTCTTAGACGGCACTCCTCTTCCTGGTCCTCCCAAAAGAAATGCCTAG 1488 0.4059 MGKASSTCILLFFLILSLFVAEIYGNRQVQALNKLHKSKSRGISQIDRGEFEVEEVVYDGIVHSQEGLKEKDRIERLPGQPLVSFSQYGGYVTVDKVAGRAFYYYFVEAQRSKQTLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLYRNIFSWNKVANVLFLESPAGVGFSYSNKSKDYDTNGDKKTAADNYLFLVNWLERFPEYKDRDFYIAGESYAGHYVPQLAHTILYHNKKANKKIINLKGILIGNAVINDETDLLGMYDYLASHAIISDKAAYEINHACDFSSDNLTSGCEAAEDEIEKNIEYIDLYNIYAPVCKNTNLTALPKRNSIVTDPCSEYYVYAYLNRKDVQEALHANVTNLKYDWEPCSDVITKWVDQAETVLPLLHEFLNNSLRVWILSGDTDGRVPVTSTKYSVKKLNLPIETVWHPWFSYGEVGGYAEVYKGGLTLATVREAGHQVPSYQPARALTLIKYFLDGTPLPGPPKRNA 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02216 495 Gene3D alpha/beta hydrolase 68 326 IPR029058 -
Pumo11g02216 495 FunFam Carboxypeptidase 389 484 - -
Pumo11g02216 495 FunFam Carboxypeptidase 68 326 - -
Pumo11g02216 495 Gene3D - 343 380 - -
Pumo11g02216 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 203 228 IPR001563 GO:0004185|GO:0006508
Pumo11g02216 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 454 467 IPR001563 GO:0004185|GO:0006508
Pumo11g02216 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 166 IPR001563 GO:0004185|GO:0006508
Pumo11g02216 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 177 IPR001563 GO:0004185|GO:0006508
Pumo11g02216 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 73 471 IPR001563 GO:0004185|GO:0006508
Pumo11g02216 495 ProSitePatterns Serine carboxypeptidases, serine active site. 217 224 IPR018202 GO:0004185
Pumo11g02216 495 Gene3D - 389 484 - -
Pumo11g02216 495 Pfam Serine carboxypeptidase 79 483 IPR001563 GO:0004185|GO:0006508
Pumo11g02216 495 SUPERFAMILY alpha/beta-Hydrolases 77 488 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02216 Pumo-Chr11 54668767 54674451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02216 351 487 Calmodulin-binding Proteins AT2G22960 29.927 1.04e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02216 K16297 - gmx:100783864 869.381