Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02203 ATGGAGAAGTACCTGAGAGAAAACTTTAGCGTGCAGCCGAAGAACCCGTCCGAGTCGGCCCTCCGCCGATGGAGATCCGCCGTCTCCGTCGTCAAGAATCCCCGCCGCCGCTTCCGCATGGTGGCCAATCTCGCCCAACGCGCCGACGCCGAACAAAAACGCAAGAAGCTCCAGGAAAAGATACGGGTGGCTCTCTATGTGCAAAAGGCAGCGTTGCATTTTATTAACGCTGGGAACCGTGGTGGTGGCATGCTCTCCAAAGAGATTCAGGAAGCAGGCTTTGGAATTGAGCCCGACGAATTAGCCTCCATTGTTCGATCCCATGACACCAAATGTTTAGAACATCATGAAGGAGTTGAAGGAGTAGCAAGAGCTGTTCGTGTGTCATTGCAAGAGGGCGTTAATTCACTCGATGTTGAGCATAGACAAAATATCTATGGTTTTAACCGCCATGCCGAGAAGCCCCCTAGAAGCTTTTGGATGTTCGTTTGGGATGCAATGCAGGACTTAACTCTAATCATCCTTATGGTATGTGCTTTGGTTTCAGTAGGTGTTGGAATCTTAACTGAAGGTTGGCCAAAAGGTATGTACGATGGAGTGGGAATCATACTATGTATCTTTTTAGTGGTCTTTGTCACTTCAATCAGTGACTATAAACAGTCTTTGCAATTTAAGGATTTGGATAAAGAAAAGAAAAATGTGAGCATTCAAGTTACAAGAGACGGTAGAAGACAAAAGGCTTCAATTCATGATTTAGTGGTAGGAGATATAGTCCATCTGTCAATAGGAGACATAGTTCCTGCAGATGGGTTATTCATATCAGGTTTCGGCTTATCAATAGATGAATCAAGTCTATCAGGTGAGAGTGAGGCTGTGAATGTTGATCAACAGAAGCCTTTTCTTCTATCAGGGACCACGGTGCAAGATGGGTCTGCTAAGATGCTGGTGACATCCGTTGGTGTGAGGACTGAATGGGGAAGATTGATGGATACTCTGAACGAAGGGGGAGATGATGAGACACCACTTCAGGTCAAACTAAATGGAGTTGCCACCATTATTGGAAAGATAGGCTTGGGTTTTGCAATACTCACATTCATGGTTCTGACGGGCAGGTTTTTGTTGGGGAAAATAGCTCACCATGAGATCACAAAATGGTCCCTAAATGATGCATCTAGCCTTCTCAATTTTTTTGCCACTGCTGTCATTATAATAGTTGTGGCAGTTCCCGAGGGTCTGCCATTGGCAGTCACACTAAGCCTTGCATTTGCAATGAAGAAATTGATGAATGACAAGGCACTAGTCAGGCACCTCTCCGCATGCGAGACCATGGGTTCAGCTGGTTGTATTTGCACTGATAAAACTGGGACTTTGACTACAAATCACATGGTTGTAGACAAGATATGGATTTGTGGACAAACTAAGGCCATTAAAATCGGCGACGGAGAAAATGTGTTGAAGCCCTCAATTTCTGAACAGATATTTGATCTCCTTTTGCAATCCATATTCCAGAATACTGGCTCAGAGATAGTCAAAGGACAAGATGGAAGGAACAAGATCATGGGTACTCCCACAGAGTCTGCATTGCTGGAATTTGGCTTGCTTTTGGGAAGTAATTCCAAGTCTTATAACGACAAGTATAAAATAGTGAAGGTTGAGCCTTTCAATTCAATCAGAAAAAAGATGTCAGTGCTGGTGGCTCTTCCCAGTGGCACCAACAATTATCGAGCATTTTGCAAAGGAGCATCAGAAATAGTTGTGAAAATGTGTGACAAAGTTGTTAATGCAGACGGCAAAGTCGTCCTTTTGAACGAACAGCAAAGGAATAGCATCACAGAAGTTATCAATGCTTTTGCTTCTGAGGCTCTGAGAACACTATGCATTGCCTTCAAGGATATTGAAGGATGTTCTGAAGGTGATAGTATTCCTGAGGATAAGTACACGTTGATAGCTATTATCGGGATCAAGGATCCCGTGAGGCCTGGAGTAAAAGAAGCTGTTAAGACCTGTTTAGAAGCTGGCATTATTGTTAGAATGGTAACTGGTGACAACATAAATACTGCTAAAGCAATAGCTAGAGAATGTGGCATATTGACAGATGGAATCGCGATAGAGGGACCAGATTTCCGGAACAAGAGCCCGCAAGAATTGATGAACATAATACCAAAAATACAGGTAATGGCCCGATCCTTGCCTCTTGACAAACACACCTTAGTGAAACATTTGAGGAATGATTTTAATGAGGTTGTGGCAGTAACTGGTGATGGGACCAATGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTTGCTATGGGTATTGCAGGGACAGAGGTTGCAAAAGAGAACGCGGATGTGATTGTAATGGATGATAACTTCACAACCATAGTGAATGTTACCAGATGGGGCCGTGCTGTTTATATTAATATACAAAAGTTTGTCCAGTTCCAGTTAACAGTTAATGTTGTGGCTCTCATGCTGAATTTTGTTTCAGCATGCGTGTCAGGCTCTGCTCCTCTTACTGCTGTTCAAATGCTTTGGGTAAACATGATCATGGACACTCTGGGCGCATTGGCACTGGCTACAGAACCTCCTCATGATGGGCTGATGAAGATGCCACCTATTGGAAGGAACGCCAAATTCATCACCAGGGTCATGTGGAGGAACATAATTGGTCAGAGCATCTATCAAATTATTGTCCTTTTGGTTCTCAAATTTCGTGGGAAACAGATTCTCAAGCTCAATGGACCTGATGATGCTACCTTACTTCTGAATACAGTCATATTCAACACCTTCGTATTTTGCCAGGTATTCAACGAGATAAACAGCCGTGACATGGAGAAGATTAATGTTTTGCAAGGCATGTTGAGCAGCTGGGTTTTTCTGATGGTGATGGCCACAACGATATGCTTTCAAGTCATAATAGTTCAATTTCTCGGTGCTTTTGCTCAAACAGTACCACTGAACCGGGATTTGTGGTTAGCAAGCGTGATGATTGGTGCGGTAAGTTTAGTTGTAGGTGTTGTCTTAAAGTGCATTCCAGTTCCATCGAGTAACTACGTCGCCACGCACCATGATCATGATGGCTACGAGCAGCTTCCCAGTGGACCAGAGCAGGCATGA 3120 0.4394 MEKYLRENFSVQPKNPSESALRRWRSAVSVVKNPRRRFRMVANLAQRADAEQKRKKLQEKIRVALYVQKAALHFINAGNRGGGMLSKEIQEAGFGIEPDELASIVRSHDTKCLEHHEGVEGVARAVRVSLQEGVNSLDVEHRQNIYGFNRHAEKPPRSFWMFVWDAMQDLTLIILMVCALVSVGVGILTEGWPKGMYDGVGIILCIFLVVFVTSISDYKQSLQFKDLDKEKKNVSIQVTRDGRRQKASIHDLVVGDIVHLSIGDIVPADGLFISGFGLSIDESSLSGESEAVNVDQQKPFLLSGTTVQDGSAKMLVTSVGVRTEWGRLMDTLNEGGDDETPLQVKLNGVATIIGKIGLGFAILTFMVLTGRFLLGKIAHHEITKWSLNDASSLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGCICTDKTGTLTTNHMVVDKIWICGQTKAIKIGDGENVLKPSISEQIFDLLLQSIFQNTGSEIVKGQDGRNKIMGTPTESALLEFGLLLGSNSKSYNDKYKIVKVEPFNSIRKKMSVLVALPSGTNNYRAFCKGASEIVVKMCDKVVNADGKVVLLNEQQRNSITEVINAFASEALRTLCIAFKDIEGCSEGDSIPEDKYTLIAIIGIKDPVRPGVKEAVKTCLEAGIIVRMVTGDNINTAKAIARECGILTDGIAIEGPDFRNKSPQELMNIIPKIQVMARSLPLDKHTLVKHLRNDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFTTIVNVTRWGRAVYINIQKFVQFQLTVNVVALMLNFVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKMPPIGRNAKFITRVMWRNIIGQSIYQIIVLLVLKFRGKQILKLNGPDDATLLLNTVIFNTFVFCQVFNEINSRDMEKINVLQGMLSSWVFLMVMATTICFQVIIVQFLGAFAQTVPLNRDLWLASVMIGAVSLVVGVVLKCIPVPSSNYVATHHDHDGYEQLPSGPEQA 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02203 1039 Gene3D - 447 797 IPR023214 -
Pumo11g02203 1039 NCBIfam HAD-IC family P-type ATPase 547 698 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo11g02203 1039 NCBIfam HAD-IC family P-type ATPase 718 840 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo11g02203 1039 NCBIfam HAD-IC family P-type ATPase 202 474 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo11g02203 1039 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Pumo11g02203 1039 SMART Cation_ATPase_N_a_2 113 187 IPR004014 -
Pumo11g02203 1039 Coils Coil 40 60 - -
Pumo11g02203 1039 PANTHER CATION TRANSPORTING ATPASE 73 1014 - -
Pumo11g02203 1039 SUPERFAMILY HAD-like 449 857 IPR036412 -
Pumo11g02203 1039 FunFam Calcium-transporting ATPase 460 657 - -
Pumo11g02203 1039 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Pumo11g02203 1039 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Pumo11g02203 1039 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Pumo11g02203 1039 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Pumo11g02203 1039 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Pumo11g02203 1039 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Pumo11g02203 1039 FunFam Calcium-transporting ATPase 211 333 - -
Pumo11g02203 1039 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1014 IPR023298 -
Pumo11g02203 1039 Gene3D - 133 333 - -
Pumo11g02203 1039 FunFam Calcium-transporting ATPase 650 797 - -
Pumo11g02203 1039 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Pumo11g02203 1039 SFLD p-type atpase 432 804 IPR044492 -
Pumo11g02203 1039 Gene3D - 16 76 - -
Pumo11g02203 1039 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Pumo11g02203 1039 Pfam Cation transporter/ATPase, N-terminus 114 182 IPR004014 -
Pumo11g02203 1039 Pfam E1-E2 ATPase 235 428 - -
Pumo11g02203 1039 Gene3D - 460 657 IPR023299 GO:0000166
Pumo11g02203 1039 SFLD C1.7: P-type atpase like 432 804 - -
Pumo11g02203 1039 CDD P-type_ATPase_Ca_PMCA-like 139 885 - -
Pumo11g02203 1039 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 662 IPR023299 GO:0000166
Pumo11g02203 1039 Gene3D - 165 1012 - -
Pumo11g02203 1039 FunFam Calcium-transporting ATPase 16 76 - -
Pumo11g02203 1039 NCBIfam calcium-translocating P-type ATPase, PMCA-type 110 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pumo11g02203 1039 FunFam Calcium-transporting ATPase 769 1016 - -
Pumo11g02203 1039 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo11g02203 1039 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo11g02203 1039 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo11g02203 1039 Pfam Cation transporting ATPase, C-terminus 837 1011 IPR006068 -
Pumo11g02203 1039 Pfam haloacid dehalogenase-like hydrolase 448 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02203 Pumo-Chr11 54442433 54451764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02203 57 1039 Primary Pumps ATPases AT3G57330 69.106 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02203 K01537 - gmx:100801260 1898.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02203 11 54442433 54451764 Pumo11g02203 11 54442433 54451764 ECH