Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02202 ATGGAGGAGTTATGCGCCTTGTGTGAGAAGAGGGCGATGATGCTGTGCGACTCGGACCAGGCTAAGCTATGCTGGGACTGCGACGAGACAGTTCACAGCGCCAATTTCTTGGTGGCTAAGCATTCGCGAGTCCTTTTGTGTCGTTTATGCCATTCCCCGACTCCCTGGAAGGCCTCCGGCACCAAACTCACGCCCACCGTTTCGTTTTGTCACCGTTGCGTCGCGGATCGACACGCCAAGTTGCACCAATTGCTCAATAATGTTCAACAACATCGTCATTCTGTGGACGATGATGCCTATGATCTTTTTTACGATGATGATGATGATGATGAGGAAAGGGAGAATCAACCGGTTCCATTGTCCTCTAGTTCTGCCACGTCACCCAGCGGTGCCAGTTTAGCTTTGAAGCGACTAAGAAATAACTCTTTTTCTGTCGATTCCCATGATCAGACAGAGAGTTCTTCATCTGAGATGCTTAGTGCTACATTGCCCATTAGAGATGAATCAACCTCTATGACCGTATTGAAGAGACATCGAGATGATCGACCAAATTATTGA 558 0.4821 MEELCALCEKRAMMLCDSDQAKLCWDCDETVHSANFLVAKHSRVLLCRLCHSPTPWKASGTKLTPTVSFCHRCVADRHAKLHQLLNNVQQHRHSVDDDAYDLFYDDDDDDEERENQPVPLSSSSATSPSGASLALKRLRNNSFSVDSHDQTESSSSEMLSATLPIRDESTSMTVLKRHRDDRPNY 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02202 185 Pfam B-box zinc finger 4 45 IPR000315 GO:0008270
Pumo11g02202 185 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 150 - -
Pumo11g02202 185 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Pumo11g02202 185 MobiDBLite consensus disorder prediction 103 185 - -
Pumo11g02202 185 CDD Bbox1_BBX-like 4 46 - -
Pumo11g02202 185 MobiDBLite consensus disorder prediction 117 169 - -
Pumo11g02202 185 MobiDBLite consensus disorder prediction 171 185 - -
Pumo11g02202 185 SMART bboxneu5 1 46 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02202 Pumo-Chr11 54430194 54431019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02202 1 101 C2C2-CO-like Transcription Factor Family AT4G27310 48.515 1.30e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02202 - - gmx:100818267 234.958