Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02198 ATGGCCAAAAAGAAGAGCTGGTTTAGTCTGGTGAAGAGGCTCTTTATATGGGACACACATTCCACACAAGAAAAGAAGGAGAAAAGAAGGAAATGGATATTTGGAAGGCTAAAGAGCAAGAGATTACCTTCAATTAAAGCTCCAGTACCATCAAAAGGAACAACACTAAGTGAAGCAGAGGAAGAACAGAGCAAGCATGCTTTAACAGTGGCCATTGCCTCAGCTGCTGCTGCTGAAGCTGCTGTTACTGCTGCTCATGCTGCTGCTGAGGTTGTTCGCCTCACTGGGGTCTCACCATCTTCCCTTCAACGCAAAGAAAACTCAGAAGAATCTCATCCTGTTAAAACTAGGAATGGTGCTCCTCAATCCACATACCAGTGCCAGAGGGAGATTAAAGAATCTGCTGCAGCCATCAAAATTCAAACTGCATTTCGGGGTTACCTGGCAAGGAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGCAGAGCAGTAAGACGCCAAGCTATGAGTACTCTTAAGTGCTTACAGTCCATTGTGAGTATCCAATCACAGGTCTGTGCCAGGAGGCTCCAAATGGTTGAAGGGAAATGTGATTACGCTAAAAATGAAGAGATGCAAGATTCTAAAGACAAGATAATTAGGATGGACTCGAACAGTGAAAGAAAGTGGGATGAAAGCACAGTATTGAAGGAAGAAGTAGACACCTCTTGCACAAGCAAGAAAGAAACAGTTCTCAAGAGAGAAAGAATAAAAGAATACTCATTTAACCATAGAAGGTCGGCAGAGTCAGAAAGAAGTAAAGTAAATGGAAGATGGAGGTACTGGCTAGAGCAGTGGGTAGATACACAGCTTTCAAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTTAGCTCACATTCTAGAGCTGGGGAGGAATATGGAGGAAGGCAACTTAAGCTGAGAAGTATTAACAGACAAAGTCCAGTTGAAGGATTAGATTCTCCAACACTTGGTTCAAGAAGATCTTTTCCTCATAGGAGGCAGTGTTCAGTGGGAGAAGACCACTCATTTGCAAGCTCTCCTGCAACTCCAGCATACATGGCTGCAACAGAATCAGCAAAAGCAAAAGCAAGATCAACAAGCTCCCCAAAAATAAGGACTGGGGGGAATGTGGACATGAACTCTGATAGCTATTCACCATGCAAGAAAAAGCTATCCATTGCATCTTCTATTAACAGTGAAGTGCTTAGTAGTGGTAGGATGGGCAAGCTCAGTGGTAACCAGCAAAGATCTCCAAGCTTTAAGGGCCTTTCAGTGCCTATAAAATCAAGCCGAACTATCAAGGATCTCAGCATTAATTCAGATTGCTCACTGCCTAATTGGGATCGACAAGGTTCCTTCAAATGA 1410 0.4312 MAKKKSWFSLVKRLFIWDTHSTQEKKEKRRKWIFGRLKSKRLPSIKAPVPSKGTTLSEAEEEQSKHALTVAIASAAAAEAAVTAAHAAAEVVRLTGVSPSSLQRKENSEESHPVKTRNGAPQSTYQCQREIKESAAAIKIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCARRLQMVEGKCDYAKNEEMQDSKDKIIRMDSNSERKWDESTVLKEEVDTSCTSKKETVLKRERIKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRAGEEYGGRQLKLRSINRQSPVEGLDSPTLGSRRSFPHRRQCSVGEDHSFASSPATPAYMAATESAKAKARSTSSPKIRTGGNVDMNSDSYSPCKKKLSIASSINSEVLSSGRMGKLSGNQQRSPSFKGLSVPIKSSRTIKDLSINSDCSLPNWDRQGSFK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02198 469 Pfam IQ calmodulin-binding motif 135 154 IPR000048 GO:0005515
Pumo11g02198 469 MobiDBLite consensus disorder prediction 419 440 - -
Pumo11g02198 469 PANTHER IQ-DOMAIN 5-RELATED 1 409 - -
Pumo11g02198 469 ProSiteProfiles IQ motif profile. 157 184 IPR000048 GO:0005515
Pumo11g02198 469 FunFam IQ-domain 11 132 183 - -
Pumo11g02198 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 175 IPR027417 -
Pumo11g02198 469 Pfam Protein of unknown function (DUF4005) 349 434 IPR025064 -
Pumo11g02198 469 MobiDBLite consensus disorder prediction 100 124 - -
Pumo11g02198 469 MobiDBLite consensus disorder prediction 375 400 - -
Pumo11g02198 469 ProSiteProfiles IQ motif profile. 133 161 IPR000048 GO:0005515
Pumo11g02198 469 MobiDBLite consensus disorder prediction 305 400 - -
Pumo11g02198 469 SMART iq_5 132 154 IPR000048 GO:0005515
Pumo11g02198 469 Gene3D - 132 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02198 Pumo-Chr11 54390994 54394451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02198 1 469 IQD Protein Family AT5G13460 46.516 2.26e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02198 - - gmx:100800192 825.469