Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02190 ATGGACTCAGGTTCACAGTACCACCAGGGTGTGCAAAGGATGAACTGGGATGATCATGAGGGCATACGCCTAATCAATCTTCTTAATGACTGTATCGCACTTACCGAATCAGGCAACTTCATTGGTGCAGATATTGCACTCTACCATCTCTCTCACCTTGCTTCTCCTGATGGTGATACAATGCAACGCGTTGCCACTTATTTCATTGAGGCACTAGCCTATTGCCAAGTGGCCAAAAATTTGCGTGGTGTACCCAAAGTTCTCCATTTGATAAAAACACTATCAACCCCTGAACAACAATTTGTCAAGCAACTATTCTTTGAGTTCTACCCCTTCATAAAGATCGCACACACCATCACAAATCAGGCCATTATTGAAGCCATGCAAGGGGAAACAGCGATTAATGTCCTTGATCTCAGTCCATCTAATAATGCTCTACAGTGGACTAATCTCATGCAGGGTTTAAAAGAGCGTTTACAAAACACACCATATCTGAAAATTACTATCACAGCCATACATGAGAAAAAGGAAGTGTTAGAGCAAATGGGGTTGCATCTTGGAGTTGAAGCTGAAAGATTGCATTTCCCTTTCCAATTCAATCCTGTTGTAAGCAGTTTGGAGAACCTTGACCCTGAGACATTGCCTATCAAGAAAGGTGAGCCTCTTGCAATTAGTTCTGTGCTTCAGATTCACTCTCTTCTTGCCACTGATGATGATGAGATGGTCAAAATGAGGGGTGGTCAAAGGATTTTTGCTGAGATGCTTGCCAAACCGAAAAAGAAGAAGGTGAATCCAAGCCCTGATTCAGCACTCTCACCTTTTTCTCCGTGTCCATCACATAAGATGGAGTCTTTTCTCTATGGCCTGTGGAAGCTCCAACCCAAAGTGATGGTGATCACTGAGCAAGAGTCAAATGTTAATAATGGACCTAGTTTGACAGAGAGGGTGACCAGAGCTTTGGAATTTTATAGTACACTGTTTGATTGCTTGAATGCTTCCACTTCCATAACAGACGTAAGGAGAAGCCTAATGGAGAAGATGCTACTTGGGGAAGAGATAAGGAACATTGTTGCATGTGAAGGAGTTGATAGAAAGGAGAGGCATGAGAAACTTGAGACATGGATCCCAAGGCTTGAATTGGCAGGATTTGGAAGGGTACCTATCAGCTCCAATGGGATGTGGCTGGCAACAAAGCTGTTGCAAAGCTATGTACCTGGGTACCACATCCATCAGAAGAACAAGTGCTTGTTTACCTATTGGCACAATATTCCTCTCTTTTCAACTTCAGCCTGGAAGTTTTAG 1302 0.4309 MDSGSQYHQGVQRMNWDDHEGIRLINLLNDCIALTESGNFIGADIALYHLSHLASPDGDTMQRVATYFIEALAYCQVAKNLRGVPKVLHLIKTLSTPEQQFVKQLFFEFYPFIKIAHTITNQAIIEAMQGETAINVLDLSPSNNALQWTNLMQGLKERLQNTPYLKITITAIHEKKEVLEQMGLHLGVEAERLHFPFQFNPVVSSLENLDPETLPIKKGEPLAISSVLQIHSLLATDDDEMVKMRGGQRIFAEMLAKPKKKKVNPSPDSALSPFSPCPSHKMESFLYGLWKLQPKVMVITEQESNVNNGPSLTERVTRALEFYSTLFDCLNASTSITDVRRSLMEKMLLGEEIRNIVACEGVDRKERHEKLETWIPRLELAGFGRVPISSNGMWLATKLLQSYVPGYHIHQKNKCLFTYWHNIPLFSTSAWKF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02190 433 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 427 IPR005202 -
Pumo11g02190 433 Pfam GRAS domain family 24 432 IPR005202 -
Pumo11g02190 433 ProSiteProfiles GRAS family profile. 15 432 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02190 Pumo-Chr11 54311953 54313555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02190 18 432 GRAS Transcription Factor Family AT1G50420 44.419 1.39e-114 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo11g02190 GRAS 1.6e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02190 - - vra:106778126 635.565