Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02167 ATGGCACCTTCTCGGAGTGTCGCTGATTCGATGCCTCCGCCAACAACACCCGAAGGCGTAGAGAATGATCTTCAGCCATTCTTTGTTCTTCATAAAGCTTCATCCCGGAGAAAAGATAGAACACCAACAGCACAGGGAAAATTGTGCAAGAGAAATGAGTTATCTTCATCATCACCACAAGGTGCAAAGAAACTTGGAGGAAGTATGACTGAAGAATGTGAACACCATTTGTTTCAGCAACTGCAGATTGAAGCTTTTGACATTGTTTGGGCAAGGATTGAATCTACCATTAAGGATGTTTTAAGAGATCTCAATGCTAGTGTATTTAATGATATACAAAAATGGGTTCTGGAGTGCTTCAATGCTACTAAGTTGCTTGGAGAACCTACTACTGCTGAAGCAACTCGGTCTTTTCCCATTCTAAATAATACTACTCCTGGGCAGCTGTTCACTGCTTTCATTACTACCAGAAACATAGAGTTCGTTGATGATATATTGACATTTGAAGAGCTTGGCCACTTCTTGAAATCCCATGGATGCCATGTAGCTAAGCTTTCATCACTGGAGTTTTCATCAAAAAATGGGATTGCTGGTTGCTTGAAAGCTTTATTGCGAGAGTTTCTAGGGTGTGCTATTGATTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGTCAACTACAATAAACCACTGGTGCTGATCGTTAATGATTTGGAGAGATGTTGTGGATCAGTCTTAACTGATTTTATCTTGATGTTGAGTGAATGGGTTGTCAAGGTACCAATCATCTTCATATTTGGAGTTGTAACAACAGTGGATGCCCCCAGAAACATTCTGCCATCACATGCTCTTGAGCGTTTGTGTCCCTCTAGTTTTATGCTTGGAACACCAGCCGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAACAATGCACCACATTTAGTATTGGTCATAAAGTGGCAGTCTTCCTGAGAAACTACTTCATCAACCAGGATGGGACAGTAACATCCTTTATTAGAGCTTTGAAGGTAGCTTGCTTATTACATTTCTCAATGGAACCTCTAAGTGTCATACATGGGCAAACATTTGCTGAAGATCAGAAAGAGGTAAAATCTACACTATCACCTGAGACTCTGTTGAAATACATAGATGAACTTCCATTGTATGCAAGGAATCAAATGGTTGATCATCAGACTCAAAAAAGCATGGCTGAGGGTTTGTCAGAATTGGTGACAGTGCAGAAGCTATGGAGCACTGCAGTTCTGTGCCTATATGAAGCTGGAAAATATACCAGAGTCAGAGTGCGACTATTGGATTTGTTTTGTGAAGCTCTCAGTCAAGATTTGTACCTGTCAAGGGTTTCTGATTGTAATGTGGGAGATGAAAAAGATCGTGGTTTGTCCTCAACAAATGATCCCGGACAACAATATTCCATCATAAAAAGCGGTGGTTTTATTGGCCAGATAGTATGCAAAGTGAGGGATCTCCCTACAGGGATGCTATATCAGTTGATTGAGAGTTGGGAAAAACTTACTGCAGATATTTCAGAGATTCATGAGAAATTGAAAATGTTGCAATCTTCAGTAAGATGTGAAGATGGAAAGAGTTCACGCAAGAGTTCCAAGGACAATTCCAAGAGATATGCGTCAAACCTTAACAAGGATGCGAGAATGTTAAATTCACAAGCTATCGCATTTTTAGATTGTCTAGTTAGAAATTTTTTGAAGCCCATTGAAGGCGTGCCTTTCCATGAAATTTTCTGCTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGTTGATCTATTGGAGTTCCATAAGATTTTAAGGTGCAGTTGCTGTAGCAAGAGTGGTAATGCCCTATTGCCATCCAGGCATGATTCCTCAATCATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATTTTCATGACTGGTTCCAGTCTTTTAGAACAATTGTTCTTCAACATAAAAATAAACGGAAACAAAATTCAAAGCAATCCCCCCCATCAAAGAAGAGAAAAGATATAAATGGATCTGCAGACCAAAACGAAGCATCAATTCAAGCACGCTTTTGTAGGGCAGTTACAGAGCTGCAGATCACTGGACTGGTCAAAATGCCCAGCAAGAGACGCCCGGATTTTGCTCAAAGAGTAGCATTTGGACTTTGA 2217 0.401 MAPSRSVADSMPPPTTPEGVENDLQPFFVLHKASSRRKDRTPTAQGKLCKRNELSSSSPQGAKKLGGSMTEECEHHLFQQLQIEAFDIVWARIESTIKDVLRDLNASVFNDIQKWVLECFNATKLLGEPTTAEATRSFPILNNTTPGQLFTAFITTRNIEFVDDILTFEELGHFLKSHGCHVAKLSSLEFSSKNGIAGCLKALLREFLGCAIDSADISILASWYREQVNYNKPLVLIVNDLERCCGSVLTDFILMLSEWVVKVPIIFIFGVVTTVDAPRNILPSHALERLCPSSFMLGTPAERMDAIVEAVLVKQCTTFSIGHKVAVFLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSVIHGQTFAEDQKEVKSTLSPETLLKYIDELPLYARNQMVDHQTQKSMAEGLSELVTVQKLWSTAVLCLYEAGKYTRVRVRLLDLFCEALSQDLYLSRVSDCNVGDEKDRGLSSTNDPGQQYSIIKSGGFIGQIVCKVRDLPTGMLYQLIESWEKLTADISEIHEKLKMLQSSVRCEDGKSSRKSSKDNSKRYASNLNKDARMLNSQAIAFLDCLVRNFLKPIEGVPFHEIFCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILRCSCCSKSGNALLPSRHDSSIMYSLAQEHGDLINFHDWFQSFRTIVLQHKNKRKQNSKQSPPSKKRKDINGSADQNEASIQARFCRAVTELQITGLVKMPSKRRPDFAQRVAFGL 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02167 738 Pfam Origin recognition complex winged helix C-terminal 609 736 IPR040855 -
Pumo11g02167 738 CDD Orc3 587 736 - -
Pumo11g02167 738 CDD Orc3 84 363 - -
Pumo11g02167 738 MobiDBLite consensus disorder prediction 1 68 - -
Pumo11g02167 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 737 IPR020795 GO:0003677|GO:0005664|GO:0006260
Pumo11g02167 738 MobiDBLite consensus disorder prediction 48 64 - -
Pumo11g02167 738 MobiDBLite consensus disorder prediction 673 696 - -
Pumo11g02167 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 70 209 IPR045667 -
Pumo11g02167 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 226 363 IPR045667 -
Pumo11g02167 738 MobiDBLite consensus disorder prediction 32 46 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02167 1 707 Core DNA Replication Machinery Family AT5G16690 45.856 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02167 K02605 - gmx:100780646 1346.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02167 11 54085119 54098264 Pumo11g02167 11 54085119 54098264 ECH