Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02163 ATGGTATCACTTGAATCTGGAAAGAAATTTGTCAAACATTCTATGATTCAGAACGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTTTCATGGGGTCAAAGGCTGAAGAATTCTCTGATGAAAACTGTCGCATAGGGGAGGCTAATCAGTATCGTGATGAGGGTGATAGATCTTCTCTTGGGAGCAGAGCTTGTGAAAGGTTGAAGCATGCTGTCAGTGAAACCAGTCACAAGCCTAGTGTTTCTTCCACTCATGATTCTCTATCTGAAAATGCTGAGAACAGACGAGCCTTATCAGAGAAGTTTCAGGATTCCAAGTGTTTAGAAAGTCTTGATGATAGCACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGCAGTAGCCATCAAATAAATACAGACAGAATAAATATATCTTGTAGTTCAACTTCAGTTGGTCACTTAGGGGCAGAAGGATCTGGAAATGGGCCATCTGTTGACATGTCTGGTTTGTCAGAATGCTGTATGGAAAATGTTGATTCATCATTGACCAAAGAGGGAGTACCTATTATTGTTCCTGGTGAAAAATCTCTGGCACATAAGGAAAACTTAAATAATGGTACAGCCAAGGTTTCAATAGAAATATGTCCAAAGTCAGAAGCAGATACTGAAAATAATGTTGATGTTGCTAAAGATGATGATCATAAATATTCAGCCAATGATGGACTGCATGAGAAGGTTGAGGAGCTGGTTAAATCACCTGGCAGGGCTGAACCTCAATCAGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGCGATGGCGCAGAGCACACCTACTGCATGCGGGAAATGCTTGAGAAGGTCCCTGAAGGGGACTGGTTATGTGAAGAATGCAAGTGTGCAGAGGAGACTGCAAATCGAAGGCTAGATATTGAAGAAAAAAAAATTCATAAAGTTAGTTCAACTTCACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCGAGCACAGGATCACCAAAGGCATCAAGCCCCAAGAGAATAGCCCCACTGTCACGGGAATCTTCGTTCAAGAGTGTGGATAAAGGAAAGATGAAATCTGGTCAACAGATCCCCATGCGTAACCACCTCGGTGGAGATGACACAGAACTTGCCCGTTCTCTTTCCACTGGCCCTCGGAGTCAAAATGCAAGGAGTACATTGTTGAAGTCTAATTCATTCAACTTCAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGCTGTTCCCCAAAAGCAGAAAGGTGGTGTCGAACATATTTCTAAGAATATGGAGACACCTGCTGGGATGATAAGCAAATCAATGTCATTCAAATCCTCGAATTTGGGTCGTTCAAATGCTGTTGAATCAAAAGTTAAAATGATTTCTTCTAAGCCTGGAACTGCTCAGGATTTGAAAGCGTCAAGACATGCAAAAGAATCTGGTTCGTTTGACAGGAAAATTCTGTCTAAGATTGATCGACCTGTCATTTGTTCAACCATGGTTAGTTCTGTTGTTTCCACATCAAAGGGTGATCAGAAGCTTACACCACATGGTGAAACTGCTAAACCTTCTACAGTTAACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAATTATATTCATTATCAAAGTCTATGAATAATACAAGCAGTAAAAGTCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACAAGTGTCGATGAAACTCAACAGGATAGGCTGCCTCGATCACAGGATACAGCTAATCAGGTTGACAAAACCAAAGATAGTTCTAGTGATCATGTGAAGTCTGGTGTTACTAATGCTTCAAAAAGCTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGTACAATTAGTGGTACGCAGGAATTTGGTGCTGAATCATCAGTCACTGCCACAAGTAGTTCAAAAGAGGAGATGCATAAGGGAAATAAATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAGGAAAGAAGCTCCTGATCAAACTAATGAGTTTCCTACATCAGGCACTGGTTTGAAATGCGAAGTCACTTCTCAAGACCAAGTGTTGGTTTCCAACACTTTGAAGAATAGTATATCTGCTGAAGAAAGCAATATGAAGCAGGAAATCATTGAGAATTCTACATTTGAAACCTCCAAATGTCCATCTGCCAATGATCTGAAGCAACTTAAATTTTCTCGAACTGATTTTTGCTCTCAGCTGAGAAAGTCAGATTCTGTTGGTCCCACTTCTGGAAAGCCTGTAGTGAGAGACTTGCCCAATAATGGCATGGCAATATCAAGTGTTCTTTCAAAGATGTCAGTCATTCCAGAATATGAGTACATCTGGCAGGGTGTCTTTAAAGTGCATAGAAATGGAAAGCCTCCTGACTTGTATACTGGAATTCAAGCACATTTATCTGCATGTGCTTCCCCTGAGGTTCATGAGGTAGTGAAGAAATTTTTACCTGAAGTTTCTCTAAATGAAGTTTCTCGTTTGAGCACATGGCCTTCACAATTTCATCAAGTTGGTGCTAAGGAAGATAATATCGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTATGAGAGGTACTACAAGGGTCTATTGGATCACATGATTAAAAATGATTTAGCACTTAGGGGGACTTTTGATGGTGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGATTCACAACGTTGGAATATGTTATTTTTCCTATGGGGTATATTTAGAGGGAGGAGGATCAATCATTTAGATTCTGCAAAAAAGATATGTATTCCCAGTTTGAATGTGATTCCAAAAGAGAAAGATTTTCCAACTGCTGTCATGACTTTGTCTGAAACTCGGTGTTCACCTAAGCGCATGGATGAAGAGTCCATTGACCAAGGTCACAATATGGTAAGTAGGAATTTTGATGGCAAAGAAACTATTTTTGACCAGACACATTTGGGTTTACAAGTAAACTTAGAGAGACAAGACAGTAGAATCAACACCAAATCTACATCAGGGATTCCGACCACCAGTACACAACTGTGTCAAGAAATGAATTCCACTGGTTTGTCCCTGAGAGATAGTGTACCAGAGCATCGACAATACATAGAGTCTAAACCTCCTGAAGCAATGGGAACTAGTGTAAGTAGTAGGATTGTGGAAACAAAAACTAATCATGATATTTCTGTTAAGCAAGAGGACTCTTTGTCTTCGGGGATCCCTTCTGTTGGTTGCCAAGAGATAGATACTGCAAGCAATATCAGTAAGGATAAAATTTTGGACAGAACAAACAATGATGAGAATCAGCAAAGGCCTAAAAGGAAACAGATGGAAGATGATCTTGATATTAACGTGGAGGCAACGTTTCAGGGAGACCTGACTGTGAAAGCAGTCAACTGTGAGCTACCTAATGATAAAAAAGTTAAGCATATAGATCTTTCAGATACAGTTGTGGAGGCTTCTGCAGTTAGTTGTCAGAAAATGCCTTGGAATGAGGTAAATGGCAAATTTGAAGACAGAGAAAGTTATAGCAAGAAGCTGCAAACAGGTTTCGGGGGAATTCACGGATGTTATGATTTTGGAGCCATGAAATCTTTTAATGGTAGTTTTGCATCACTTGTAAATGATCTTGGTTCCTGTTCTTCATTGGAGGACAAACAGTGCAAAGAACCTTGTGATGAGAAAATCATCCACGAGGACTTTGGAACGATGGAAAGAACCTTCTTTCCTGTTGATACTCGTAACAAAAATGGCTCGGGGATGGTGCTGAATTGCGAGTCACTGAACGGGCCTCACGATTACGTGGACCGATTTCAAGTTGGGATTCCAAATCTAGAGCTTGGTTTGGGGGGTGAAACAAAACCGTCACCCAAGGGTATGCTGCCTTTCTTTGTTGGTGCAGTTGACAAGAAAAATAGCCGGGAAAAGACGACTCCAGAGCGAGAGGATGAGAACGTTGCTGCATCTCTTTCCTTGTCTCTATCCTTTCCATCTTCAAACGAGGAACACATGAAACCTGTTTCAAAAGCTGAGCCTTTGCCGGATGGGCATAATGTGAATTCGCCGTTTCTCCTTTTTGGGAGATTCACGGACAAATAA 4287 0.4073 MVSLESGKKFVKHSMIQNADMRLESGTCNVCSAPCSSCMHLNRAFMGSKAEEFSDENCRIGEANQYRDEGDRSSLGSRACERLKHAVSETSHKPSVSSTHDSLSENAENRRALSEKFQDSKCLESLDDSTSCISRTSNANLASSSHQINTDRINISCSSTSVGHLGAEGSGNGPSVDMSGLSECCMENVDSSLTKEGVPIIVPGEKSLAHKENLNNGTAKVSIEICPKSEADTENNVDVAKDDDHKYSANDGLHEKVEELVKSPGRAEPQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKCAEETANRRLDIEEKKIHKVSSTSQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIAPLSRESSFKSVDKGKMKSGQQIPMRNHLGGDDTELARSLSTGPRSQNARSTLLKSNSFNFNSKPRVKLVDEAVPQKQKGGVEHISKNMETPAGMISKSMSFKSSNLGRSNAVESKVKMISSKPGTAQDLKASRHAKESGSFDRKILSKIDRPVICSTMVSSVVSTSKGDQKLTPHGETAKPSTVNNNREFKVNQDGKLYSLSKSMNNTSSKSPEPQVSSDRTSTSVDETQQDRLPRSQDTANQVDKTKDSSSDHVKSGVTNASKSSFCRKCKDFGHATECCTISGTQEFGAESSVTATSSSKEEMHKGNKLKAAIQAALLRRPEIHKRKEAPDQTNEFPTSGTGLKCEVTSQDQVLVSNTLKNSISAEESNMKQEIIENSTFETSKCPSANDLKQLKFSRTDFCSQLRKSDSVGPTSGKPVVRDLPNNGMAISSVLSKMSVIPEYEYIWQGVFKVHRNGKPPDLYTGIQAHLSACASPEVHEVVKKFLPEVSLNEVSRLSTWPSQFHQVGAKEDNIALYFFAKDIESYERYYKGLLDHMIKNDLALRGTFDGVELLIFASNQLPEDSQRWNMLFFLWGIFRGRRINHLDSAKKICIPSLNVIPKEKDFPTAVMTLSETRCSPKRMDEESIDQGHNMVSRNFDGKETIFDQTHLGLQVNLERQDSRINTKSTSGIPTTSTQLCQEMNSTGLSLRDSVPEHRQYIESKPPEAMGTSVSSRIVETKTNHDISVKQEDSLSSGIPSVGCQEIDTASNISKDKILDRTNNDENQQRPKRKQMEDDLDINVEATFQGDLTVKAVNCELPNDKKVKHIDLSDTVVEASAVSCQKMPWNEVNGKFEDRESYSKKLQTGFGGIHGCYDFGAMKSFNGSFASLVNDLGSCSSLEDKQCKEPCDEKIIHEDFGTMERTFFPVDTRNKNGSGMVLNCESLNGPHDYVDRFQVGIPNLELGLGGETKPSPKGMLPFFVGAVDKKNSREKTTPEREDENVAASLSLSLSFPSSNEEHMKPVSKAEPLPDGHNVNSPFLLFGRFTDK 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02163 1428 MobiDBLite consensus disorder prediction 1150 1173 - -
Pumo11g02163 1428 MobiDBLite consensus disorder prediction 86 110 - -
Pumo11g02163 1428 MobiDBLite consensus disorder prediction 558 637 - -
Pumo11g02163 1428 MobiDBLite consensus disorder prediction 352 450 - -
Pumo11g02163 1428 SUPERFAMILY FYVE/PHD zinc finger 274 338 IPR011011 -
Pumo11g02163 1428 PANTHER - 285 1016 - -
Pumo11g02163 1428 SMART PHD_3 287 334 IPR001965 -
Pumo11g02163 1428 MobiDBLite consensus disorder prediction 1391 1410 - -
Pumo11g02163 1428 ProSiteProfiles Zinc finger PHD-type profile. 285 336 IPR019787 -
Pumo11g02163 1428 MobiDBLite consensus disorder prediction 516 536 - -
Pumo11g02163 1428 MobiDBLite consensus disorder prediction 355 390 - -
Pumo11g02163 1428 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 219 347 IPR013083 -
Pumo11g02163 1428 MobiDBLite consensus disorder prediction 434 450 - -
Pumo11g02163 1428 MobiDBLite consensus disorder prediction 558 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02163 Pumo-Chr11 54029343 54039191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02163 284 371 C2H2 Transcription Factor Family AT3G01460 31.818 2.20e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02163 - - gmx:100781187 2530.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02163 11 54029343 54039191 Pumo8g02501 8 62150741 62159859 ECH
Pumo11g02163 11 54029343 54039191 Pumo11g02163 11 54029343 54039191 ECH