Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02155 ATGGGAGGTTTCAATAAAGAAGAAGGTGTTGTGGGAGAAAAGGAAGAAGAAACCAAGTGGCCTTCATGGCTGCAGCCACTTCTCAAGACAAGTTTCTTTGTTCAATGCAAAGTCCACGCAGATTCCCACAAGAGTGAATGCAATATGTATTGCTTGGACTGTGTGAATGGAGCCCTTTGCTCTGCATGTCTCTCTTCCCACAAAGAACACAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGGGTCCAAACTTACATTATTAACAGTGCCAAGATTGTGTTCTTAAATGAAAGGCCCCAACCCAGGCCTGGAAAAGGGGTCACCAATACCTGCCAAGTCTGTGAGCGCAGCCTCCTTGATTCATTCAGCTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAAAAGTTCCGGAAGAAGAAAATGTTAGGTGAGGCAGATGGGTCTGATGGTGAAGAATCAGTAAATGCCATAAGCAATGCAAGTGCCAGAAACAAAATCCATAGCTTTACACCCTCAACACCACCACCAACAGTGGTTAATTACAGAACTGCTAAGAGAAGAAAAGGAATTCCACATAGAGCTCCAATGGGTGGAGGGCTTATTATAGAATACTAA 669 0.4335 MGGFNKEEGVVGEKEEETKWPSWLQPLLKTSFFVQCKVHADSHKSECNMYCLDCVNGALCSACLSSHKEHRTIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKFRKKKMLGEADGSDGEESVNAISNASARNKIHSFTPSTPPPTVVNYRTAKRRKGIPHRAPMGGGLIIEY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02155 222 CDD Bbox2 36 75 - -
Pumo11g02155 222 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 214 - -
Pumo11g02155 222 Pfam PLATZ transcription factor 76 147 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02155 Pumo-Chr11 53914801 53916878 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pumo11g02155 PLATZ 3.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02155 - - gmx:100810757 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02155 11 53914801 53916878 Pumo8g02498 8 62132259 62134433 ECH
Pumo11g02155 11 53914801 53916878 Pumo11g02155 11 53914801 53916878 ECH