Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02139 ATGTCAGAAACAGCATCTACTTCTTTTGAAACTCAACACAACACAGAATTGTGTGGACCTAAAACTACTGCTACCGATGAGTTAAACGTATCATCAACACCCCACATTTTCACATCAAAATTACCAGACATACCCCTCCCCAACAACCTCCCCCTCCACGAATACTGCTTCCTTAAACTCCCCGAAAACGCCCACCGGCCATGCCTCATTGCCGGCGGCAGAACCTACACCTACGGCCACACTCACCGCGCGTCAAGAAAGGTGGCCGCCGGCATGTCCAAGCTGGGCATCCAGAAGGGTGACGTCATCATGATTCTCCTCCCGAACTCCCCGGAGTTCGTGTTCTCCTTCATGGCGGCCTCCATGCTCGGCGCCGTGGCCACCACCGCCAACCCCTTCTACACCGCCGCCGAAATCTCGAAGCAACTCGCCGCCTCCAAGGCCAAGCTCGTCGTCACCCTCTCCATCCACGGCTTCAAGGTGGTGACCGTTGACGACCCGCCGGAGAAGTGCATGAATTTCCCAGAAGGCGACGAGGGCGAGGTGCCGGAGGTGGAGATATCAGCGGAGGACGCGGTGGCGCTGCCGTTCTCGTCGGGGACGACGGGGCTTGCAAAAGGGGTGGTTCTGACGCACAAGAGCCTGGTGACGGGCGTGGCGCAGAACATGGAGGGAGAGAACCCGAACGTGTACCTGAAGGAAGTGGACGTGGTGCTGTGCGTGCTACCCTTGTTTCACATATTCTCCATGCACAGTGTCATGATGTGCGCGCTCAGAGCCGGGAGTGCCATTTTGTTGATTGAGAAGTTTGAGATAAGGGCGCTGCTGGAGGCCATAGAGCGGCACAGGGTGACGGTGGCGATGGTGGTGCCGCCGCTGGTGGTGGCGCTGGCGAAGAACCCCGCCGTGGAGGACTATGATTTGAGCTCCATAAGGTTGGTCATGTCGGGGGCTGCGCCGCTGGGGCAACAGCTCGAAGAGGCTCTACGGAATAGGTTGCCTAACGCAGTTCTAGGACAGGGGTACGGGATGACAGAAGCTGGACCTGTGTTGGCGATGTGTTTGGGGTTTGCAAAGTATCCATTCCCAACGAAGACAGGGTCATGCGGAACAGTAGTGAGAAATGCTGAGTTGAAGGTCATTGACCCTCAAACTGGTTATTCTCTTCCCCGTAACCACCCTGGTGAGATTTGCATCCGTGGCCAACAGATCATGAAAGGTTACCTGAATGACGAGAAGGCGACTGAAGCAACTATTGATGTAGATGGTTGGCTTCATACTGGTGATATTGGGTACGTGGATGATGATGATGAGATTTTCCTCGTTGACAGGGCAAAGGAACTCATCAAATTTAAAGGCTTCCAGGTGCCGCCAGCAGAACTTGAAGACCTTCTTATGAGCCACCCTTCCATTGCAGATGCAGCTGTGGTCCCGCAAAATGACGATGCTGTGGGTGAAGTTCCAGTCGCTTTCGTGGTCGGCTTTGATCTTACAGAAGAGGCTGTCATGGATTTTATAGCTAAACAGGTAGTGTTTTACAAAAGACTACACAAAGTGTATTTTGTTCATGCAATTCCAAAGTCTCCAACCGGAAAGATATTAAGAAAAGAACTCAGAGCAAAGCTGGCGAGCATTATTCAGAGGTCCTAG 1650 0.5352 MSETASTSFETQHNTELCGPKTTATDELNVSSTPHIFTSKLPDIPLPNNLPLHEYCFLKLPENAHRPCLIAGGRTYTYGHTHRASRKVAAGMSKLGIQKGDVIMILLPNSPEFVFSFMAASMLGAVATTANPFYTAAEISKQLAASKAKLVVTLSIHGFKVVTVDDPPEKCMNFPEGDEGEVPEVEISAEDAVALPFSSGTTGLAKGVVLTHKSLVTGVAQNMEGENPNVYLKEVDVVLCVLPLFHIFSMHSVMMCALRAGSAILLIEKFEIRALLEAIERHRVTVAMVVPPLVVALAKNPAVEDYDLSSIRLVMSGAAPLGQQLEEALRNRLPNAVLGQGYGMTEAGPVLAMCLGFAKYPFPTKTGSCGTVVRNAELKVIDPQTGYSLPRNHPGEICIRGQQIMKGYLNDEKATEATIDVDGWLHTGDIGYVDDDDEIFLVDRAKELIKFKGFQVPPAELEDLLMSHPSIADAAVVPQNDDAVGEVPVAFVVGFDLTEEAVMDFIAKQVVFYKRLHKVYFVHAIPKSPTGKILRKELRAKLASIIQRS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02139 549 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Pumo11g02139 549 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 32 540 - -
Pumo11g02139 549 CDD 4CL 46 538 - -
Pumo11g02139 549 Pfam AMP-binding enzyme C-terminal domain 460 532 IPR025110 -
Pumo11g02139 549 FunFam 4-coumarate--CoA ligase 2 447 545 - -
Pumo11g02139 549 FunFam Long-chain-fatty-acid--CoA ligase FadD 38 446 - -
Pumo11g02139 549 Gene3D - 28 444 IPR042099 -
Pumo11g02139 549 Gene3D - 445 545 IPR045851 -
Pumo11g02139 549 Pfam AMP-binding enzyme 64 451 IPR000873 -
Pumo11g02139 549 SUPERFAMILY Acetyl-CoA synthetase-like 35 545 - -
Pumo11g02139 549 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02139 Pumo-Chr11 53737807 53741983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02139 36 477 Monolignol Biosynthesis Gene Families AT3G21240 63.124 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02139 K01904 - gmx:100790396 928.317