Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02135 ATGTGTATTCGAATCCTAGGAGCTAGTAATCGACGATATGCTTATATTGGTGACATTGTTGTTGCTGTAATCAAACAAGCAGTACCAAATACGAACTTAGAAAAATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGTAGCAACGGTATAATAATTCAGTATGATGATAATGCTGCAGTTGTCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATCTTTTGTGCAATCGCCCGGGAATTGAGACAGTTAAATTTTACTAAAATAGTTTCATTAGCACCCGAGGTATTATAA 312 0.3558 MCIRILGASNRRYAYIGDIVVAVIKQAVPNTNLEKSEVIRAVIVRTCKELKRSNGIIIQYDDNAAVVIDQEGNPKGTRIFCAIARELRQLNFTKIVSLAPEVL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02135 103 Hamap 50S ribosomal protein L14 [rplN]. 2 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo11g02135 103 ProSitePatterns Ribosomal protein L14 signature. 41 67 IPR019972 -
Pumo11g02135 103 Gene3D Ribosomal protein L14 1 103 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pumo11g02135 103 SUPERFAMILY Ribosomal protein L14 1 103 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pumo11g02135 103 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 102 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo11g02135 103 FunFam Ribosomal protein L14 33 103 - -
Pumo11g02135 103 NCBIfam 50S ribosomal protein L14 1 103 IPR005745 GO:0003735|GO:0006412|GO:0015934
Pumo11g02135 103 Pfam Ribosomal protein L14p/L23e 1 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo11g02135 103 SMART Ribosomal_L14_2 1 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02135 Pumo-Chr11 53684919 53685230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02135 14 99 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 34.884 5.28e-12 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02135 K02874 - gmx:3989333 200.29