Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02091 ATGGAGATAGAGCAAGCCACTGCCACTGCCAATGAAACAGGTGAAATGATGAGTGTTTCAGATAATAAGAGAGGGATGTATCTTGTGTGGGAAAATTTAACTGTTATAGTTCCAAATTTTGGGAATGGACACACTAGGAGATTGCTTGATGGGTTGAGTGGATATGCTGAACCTAACAGAATCATGGCTATCATGGGTCCTTCTGGCTCTGGAAAATCTACTCTTCTTGATGCTTTAGCAGGTAGACTCTCTAGAAACGTTATCATGTCTGGAAATGTGCTTTTAAATGGAAAGAAGAAGAGATTAGACTATGGAGTTGTAGCTTATGTGACCCAAGAAGACATAATGTTGGGAACACTAACCGTGAGAGAGACAATATCTTACTCAGCTAATCTAAGGCTTCCAGCTAGCATGACGAAAGAGGAGGTGAATGACATCATAGAGGGGACAATTATGGAGATGGGTCTTCAAGAATGTGCTGATCGGCTTATTGGGAATTGGCACTTGAGAGGTATAAGCGGTGGAGAAAAGAAAAGGCTAAGCATAGCACTTGAAATCCTCACAAGGCCAAGCCTCTTGTTCCTTGATGAACCCACCAGCGGTCTAGATAGTGCCTCAGCATATTTTGTTGCCCAAACTTTGAGAAATTTAGCTCATGATGGCAAGACTGTTATCTCTTCTATACATCAACCAAGTAGTGAGGTCTTTGCACTCTTTGACGATCTCTTTCTTCTTTCTGGCGGTCAAACAATTTATTTTGGACCAGCCCAAAAGGCAGTTGAGTTCTTTGCTAAAGCGGGATTCCCATGTCCAAGTAGAAGAAACCCTTCAGATCATTTCCTCCGTTGTATTAATTCAGACTTTGACGCTGTCACAACGACTATGATGGCCTCCCAAAGAGTAAATGAAGAAATATCAATAACGGGATCGTTATCAACTGCAGCAATCAAAGCAACACTCATAGAAAATTACCGATGGTCAGAGCACGCAACCACTGCAAGAGCAAGAATCAAAGAAATCTCAAACATTGAAGGACATGATTATGAAAGTAAAAGCAAATGCGAAGCCAAATGGTGGAAGCAACTATCAACGCTGACTCATAGATCTTTCGTGAACATGTCTAGAGATGTTGGATACTACTGGATTAGGATAACTATCTATATTGCCTTATCTTTGTGTGTTGGAACAATCTTTTATGGAGTTGGATCGAGTTATGGAGCTATTTTTGCAAGAGGAGCATGTGGCGCTTTTATATCAGGTTTCATGACATTCATGTCCATAGGGGGCTTCCCGTCTTTCATAGAAGAAATGAAGGTTTTCTACAAAGAAAGGCTCAACGGGTATTATGGCGTTGGAGTTTACATTCTATCAAATTTTCTGTCTTCCTTTCCGTTTGTGGCAGTGATGTCCATTGCTACGGGGACAATAACCTATTATATGGTTAAGTTTCGTCCAGAATTTTCACATTATGTGTATATCTGTCTGGATCTTATCGGGTGCATTGCGGTTGTGGAGAGCTCCATGATGATTATAGCTTCACTGGTTCCCAACTTCCTCATGGGATTGATAATTGGAGCCGGATATATTGGTGTTATGATGATGACTGCTGGCTATTTCCGTCAGATCCATGATCTTCCTAAGATCTTCTGGCGTTACCCAATCTCATACATCAATTATGGCGCATGGGGATTGCAGGGAGCTTTCAAGAATGACATGATTGGGATGGAGTTTGATCCCTTAGAACCTGGGGGCCCAAAACTGAAAGGAGAAATCATTCTCAAAACCATGCTTGGCGTTCAAGTTGAGAATTCAAAGTGGTGGGACTTGGCTGCAGTCATGATCATCCTCGTATCGCTTAGAGTTCTTTTCTTTTTCATTCTGAAATTCAAGGAGAGAGCTGCACCTTTTCTTTATAGTATCTACGCCAGGCAAACTCTGCAACGTATCAAGAAGCGACCTTCGTTCAGGAAAGGACCATCTTTCCCTTCCAAAAGGCACCAATCACTGCATCCCTTGTCTTCTCAAGAGGGTCTCAACTCCCCTATTCATTAG 2052 0.4191 MEIEQATATANETGEMMSVSDNKRGMYLVWENLTVIVPNFGNGHTRRLLDGLSGYAEPNRIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGNVLLNGKKKRLDYGVVAYVTQEDIMLGTLTVRETISYSANLRLPASMTKEEVNDIIEGTIMEMGLQECADRLIGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTSGLDSASAYFVAQTLRNLAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGPAQKAVEFFAKAGFPCPSRRNPSDHFLRCINSDFDAVTTTMMASQRVNEEISITGSLSTAAIKATLIENYRWSEHATTARARIKEISNIEGHDYESKSKCEAKWWKQLSTLTHRSFVNMSRDVGYYWIRITIYIALSLCVGTIFYGVGSSYGAIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGVGVYILSNFLSSFPFVAVMSIATGTITYYMVKFRPEFSHYVYICLDLIGCIAVVESSMMIIASLVPNFLMGLIIGAGYIGVMMMTAGYFRQIHDLPKIFWRYPISYINYGAWGLQGAFKNDMIGMEFDPLEPGGPKLKGEIILKTMLGVQVENSKWWDLAAVMIILVSLRVLFFFILKFKERAAPFLYSIYARQTLQRIKKRPSFRKGPSFPSKRHQSLHPLSSQEGLNSPIH 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02091 683 Gene3D - 17 267 IPR027417 -
Pumo11g02091 683 MobiDBLite consensus disorder prediction 666 683 - -
Pumo11g02091 683 MobiDBLite consensus disorder prediction 652 683 - -
Pumo11g02091 683 FunFam ABC transporter G family member 11 22 266 - -
Pumo11g02091 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 265 IPR027417 -
Pumo11g02091 683 SMART AAA_5 58 248 IPR003593 GO:0016887
Pumo11g02091 683 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 272 IPR003439 GO:0005524
Pumo11g02091 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 17 652 - -
Pumo11g02091 683 CDD ABCG_EPDR 25 254 - -
Pumo11g02091 683 ProSitePatterns ABC transporters family signature. 172 186 IPR017871 GO:0005524|GO:0016887
Pumo11g02091 683 Pfam ABC-2 type transporter 229 286 IPR043926 GO:0140359
Pumo11g02091 683 Pfam ABC-2 type transporter 361 569 IPR013525 GO:0016020|GO:0140359
Pumo11g02091 683 Pfam ABC transporter 49 200 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02091 Pumo-Chr11 53049773 53056432 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02091 47 243 Calmodulin-binding Proteins AT2G36910 28.571 5.09e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02091 K05681 - gmx:100806806 1266.52