Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02089 ATGGAGATAGAAGCAGCCACAGATAGCAACAAAGGGTGCAACAACAACTGGGGTGCTGTTGAGAGGGAGATGCCATACACTGGCTTTGACAGAGGAAGCTTCTTGGCTTGGCAAGATCTGAGAGTAGTGATTCCAAACTTTGGGAAGGGACCAACCAAGAGGCTGCTTAATGGACTCAATGGTTATGCTGAGCCTGGTAGAATCATGGCTATTATGGGACCTTCTGGCTCTGGAAAATCCACCCTTCTTGATTCACTTGCAGGTAGACTCTCAAAAAATGTGGTTATGACAGGAAATGTTCTTCTCAATGGGAAGAAAAAAGGCATAGGCTACGGTGTTGTTGCATACGTAACTCAAGAAGATGTGCTGCTGGGAACACTTACTGTGAAGGAGACCATATCCTACTCAGCCCATCTACGTCTTCCAACATCAATGAGCAAAGAAGAAGTGAATAGCATCATCGAAGGAACAATCATAGAAATGGGTCTCCAAGACTGTGCTGATAGGTTGATTGGTAATTGGCACTTGAGAGGTATAAGTGGAGGGGAAAAGAAGAGACTCAGCATTGCACTTGAGATCCTTACAAGGCCTCGTTTACTGTTTCTTGATGAACCCACCAGTGGCCTTGATAGTGCCTCTGCTTTCTTTGTTGTTCAAACTCTTAGAAATGTTGCTCGTGATGGAAGGACTGTTATCTCTTCCATTCATCAGCCCAGCAGTGAAGTCTTTGCACTCTTTGATGACCTCTTCTTACTATCTGGCGGCGAAACAGTTTATTTTGGAGAAGCAAAATCCGCAATTGAGTTTTTTGCTGAAGCTGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCACTTCCTACGATGTATCAATTCTGATTTCGACATTGTAACAGCTACACTGAAAGGATCTCAAAGAATTCATGTATGTATTGGCTATTAA 945 0.4339 MEIEAATDSNKGCNNNWGAVEREMPYTGFDRGSFLAWQDLRVVIPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVLLNGKKKGIGYGVVAYVTQEDVLLGTLTVKETISYSAHLRLPTSMSKEEVNSIIEGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKSAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIHVCIGY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02089 314 FunFam ABC transporter G family member 11 29 273 - -
Pumo11g02089 314 Pfam ABC-2 type transporter 236 291 IPR043926 GO:0140359
Pumo11g02089 314 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 271 IPR027417 -
Pumo11g02089 314 Pfam ABC transporter 56 207 IPR003439 GO:0005524
Pumo11g02089 314 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 279 IPR003439 GO:0005524
Pumo11g02089 314 CDD ABCG_EPDR 32 261 - -
Pumo11g02089 314 Gene3D - 35 273 IPR027417 -
Pumo11g02089 314 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524|GO:0016887
Pumo11g02089 314 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 30 306 - -
Pumo11g02089 314 SMART AAA_5 65 236 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02089 Pumo-Chr11 53031125 53034843 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02089 39 248 Calmodulin-binding Proteins AT2G36910 29.730 9.67e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02089 K05681 - gmx:100807692 578.17