Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02062 ATGCTAATAGCACGCTTGAGCAAATTTCCCTGCTTGCTTCCCCTGATGGGGATACCATGCAGCGAATTGCGGTATATTTTATGGAATCACTTGCTGATCGGATTCTTAAAACATGGCCTGGGATCCTACAGAGCCCTCAACTCAACCAGAATGACTTTGCTATCTGAAGAAATTCTGGTTCAGAAGCTTTTCTTTGAGCTTTTCCCTTTCTTGAAGGTAGCATTTGTTCTCACAAATCAGGCCATCATTGAAGCAATGGAAGGGGAGAAAGTGATTCACATAATTGATCTCAATGCTGCTGAAGCTGCTCAGTGGATTGCTCTCCTTCAAGTATTAAGTGCACGTCCCGAAGGCCCTCCTCATTTGAGAATCACTGGGGTTCATCAGAAAAAGGAGATTCTGGATCAGGTAGCTCATAGACTAACTGAAGAAGCAGAAAAGTTGGATATACCATTCCAATTCAACCCTGTGGTAAGCAAATTAGAAAATCTTGATTTTGACAAACTTCGCGTGAAAACTGGGGAGGCACTAGCAATAAGTTCCATTCTCCAATTACATACCCTTTTGGCCTGGGATGATGAAGCCGTGCAGAGAAAGTCTCCTCTTCTGTTAAAAAGTTCAAATGGAATTCACCTGCAAAGAGTCCTGCCAATGGGCCAAAGCACATTGGGTGATTTGCTTGAGAAAGATATGGTTAATGGGTATACCCCAAGTCCTGACTCAACCTCATCATCACCAGCATCTTTAACTACTTCCAATTCAATGAATATGGAGAGCTTTATTAATGCTTTGTGGGGATTATCACCAAAGGTCATGGTTGTGACAGAACAAGACTGTAATCATAATGGTCCAACTCTGATGGATAGGCTACTTGAAGCTCTATATTCATATGCAGCATTGTTTGATTGTTTGGAATCCACTGTCTCAAGAACATCATTGGAGAGATTAAGGGTGGAGAAGATGCTTTTTGGGGAGGAAATAAAGAACATCATTGCATGTGAGGGATCTGAAAGAAAGGAGAGACATGAAAAGCTGGACAAGTGGTTCCAGAGATTTGATATAGCTGGTTTTGGTAACGTGCCTTTGAGCTACTTTGGTATGTTACAAGCAAGGAGGTTCCTGCAGAGCTATGGTTGTGAAGGATATAGAATGAGGGATGAAAATGGTTGTGTGTTAATTTGCTGGGAGGATCGACCAATGTATTCAATATCAGCTTGGAGATCTAGGAAGTAA 1233 0.4185 MLIARLSKFPCLLPLMGIPCSELRYILWNHLLIGFLKHGLGSYRALNSTRMTLLSEEILVQKLFFELFPFLKVAFVLTNQAIIEAMEGEKVIHIIDLNAAEAAQWIALLQVLSARPEGPPHLRITGVHQKKEILDQVAHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHTLLAWDDEAVQRKSPLLLKSSNGIHLQRVLPMGQSTLGDLLEKDMVNGYTPSPDSTSSSPASLTTSNSMNMESFINALWGLSPKVMVVTEQDCNHNGPTLMDRLLEALYSYAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIIACEGSERKERHEKLDKWFQRFDIAGFGNVPLSYFGMLQARRFLQSYGCEGYRMRDENGCVLICWEDRPMYSISAWRSRK 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02062 410 Pfam GRAS domain family 43 407 IPR005202 -
Pumo11g02062 410 MobiDBLite consensus disorder prediction 235 251 - -
Pumo11g02062 410 MobiDBLite consensus disorder prediction 230 251 - -
Pumo11g02062 410 ProSiteProfiles GRAS family profile. 1 407 IPR005202 -
Pumo11g02062 410 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 39 402 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02062 Pumo-Chr11 52698747 52701291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02062 35 410 GRAS Transcription Factor Family AT1G50420 64.042 1.03e-178 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo11g02062 GRAS 8.3e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02062 - - gmx:100814131 700.664