Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02057 ATGGACAACCTCGACTTCGCCAACGACCTCCTCCCGGAGATAGCGGAACTCTCGTCGCCGTTCGGGACCTCGCCGGAGCGCATCGGCGCGTACTTCGCGCAGGCGCTGCAGGCGCGCGTAGTGAGCTCCTGCCTCGGCTCCTACTCCCCGCTGACCGCGAAATCGGTAACCCTAACTCAGTCGCAGCGAATCTTCAACGCGTTCCAATCCTACAACTCGGTCTCGCCGCTGGTGAAGTTCTCGCACTTCACCGCGAACCAGGCGATCTTCCAGGCTCTGGACGGCGAGGATCGCGTCCACATCATCGACCTCGACATCATGCAAGGCCTCCAATGGCCAGGACTGTTCCACATCCTCGCCTCTCGCTCCAAAAAGATCCGCTCCATGAGAATCACCGGATTCGGATCCTCCTCGGAGCTCCTCGACTCCACCGGCCGGCGACTCGCCGATTTCGCGAGCTCGCTCGGTCTTCCCTTCGAGTTCTTCCCCGTCGAAGGCAAAATCGGAAGCGTCACGGAACTGAGTCAACTCGGAGTTAGACCTAACGAGGCAATCGTGGTGCACTGGATGCACCACTGTTTATACGACATAACCGGGAGCGATTTAGGGACGTTGAGATTGCTGACTCAGCTTCGGCCGAAGCTGATCACGACCGTTGAACAGGATCTCAGCCACGCAGGGAGCTTCCTGGCGCGGTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGATGGTTTAGGTGCGGACAGCCTGGAGAGGCACACGGTGGAGCAGCAGCTATTGGGCTGCGAGATCAGGAACATCGTGGCCGTGGGCGGGCCCAAGAGGACGGGCGAGGTTAAGGTGGAGAGGTGGGGGGATGAATTAAAACGGGCCGGGTTTCGGCCCGTTTCGCTCCGGGGCAACCCGGCCGCACAAGCGAGTTTGTTGCTGGGAATGTTCCCTTGGAGAGGGTATACGCTGGTTGAAGAGAATGGTTCCCTCAAGCTTGGTTGGAAGGATTTGTCTCTTTTGATTGCCTCCGCTTGGCAACCGTCTGATTTGATTACTTATCCTGATTGA 1077 0.5877 MDNLDFANDLLPEIAELSSPFGTSPERIGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLDSTGRRLADFASSLGLPFEFFPVEGKIGSVTELSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSLERHTVEQQLLGCEIRNIVAVGGPKRTGEVKVERWGDELKRAGFRPVSLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDLITYPD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02057 358 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 344 IPR005202 -
Pumo11g02057 358 ProSiteProfiles GRAS family profile. 1 349 IPR005202 -
Pumo11g02057 358 Pfam GRAS domain family 2 349 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02057 Pumo-Chr11 52609755 52611760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02057 2 352 GRAS Transcription Factor Family AT5G41920 71.348 3.56e-180 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo11g02057 GRAS 4.1e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02057 - - gmx:100816249 697.967