Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02054 ATGATGATCAGCGTAAAGAGGCTTATAGAAATGGCTAGAAAGTGGCAGAAAATGGCAGCGGGAAATCGCAAGAGAATTTCATACCCAAAGCACCATGTTGATGTGCATTCTTCAACAGCAAACAAGGGACACTTCGTTGTTTACAGCGTCGATCATAAGCGATTCGTGGTTCCTCTTAAGTACCTTAGCACGAACGTGTTCAGGGAGCTACTCAAGTGGTCCGAAGAGGAGTTTGGGTTACCATCCAATGGACCTATTACGTTGCCTTGTGATAGCGTCTTCTTGGACTACGTAATCTCGTTGATTCGAGAACAAGTTCCAGAAGATGTGGAGAAGGCTTTGATCACTTCAATGGTTGCGTGCCACCATGAGGCATCATCGTCTTCGCATGGTCTTAGGCAGAGCAACGACCCAATGATTATCTATGGCTTTTGA 435 0.4552 MMISVKRLIEMARKWQKMAAGNRKRISYPKHHVDVHSSTANKGHFVVYSVDHKRFVVPLKYLSTNVFRELLKWSEEEFGLPSNGPITLPCDSVFLDYVISLIREQVPEDVEKALITSMVACHHEASSSSHGLRQSNDPMIIYGF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02054 144 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 128 IPR003676 GO:0009733
Pumo11g02054 144 Pfam Auxin responsive protein 13 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02054 Pumo-Chr11 52553645 52554116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02054 4 102 Calmodulin-binding Proteins AT4G34750 32.039 9.54e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02054 - - gmx:100802572 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02054 11 52553645 52554116 Pumo11g02054 11 52553645 52554116 ECH