Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02046 ATGGTTCCTCTATCCGGGGGTCATATGAACCCTGTTTTCACATTCATTGCGGCTTTAAAGGGTGTTGTGACCCTTTCTCGTGCTCTCCTCTACGTGTTAGCACAATGCATTGGCTCAATAATTGGTTTCTTTATACTCAAGAGTGTGATGGAGCCAAAACTAGCAGACACATATTCTTTGGGAGGTTGTGCCCTTGGTGACATAGGACAAAGTTCTGGCATAAAGCCACAAGATGCTTTGTTGTTGGAATTCTCTTGCACATTTTTAGTACTCTTTGTGGGTCTAACGTTGGCATTTGATAAGAAAAGGTGCAAGGAATTGGGCTTGCCAATGGTTTGTTTGGTGGTAGCAGCATCCTTGGCACTGGCAGTGTTTGTGTCCATAACTGTAACTGGGAGGCCAGGCTATGCAGGTGCTGGGCTGAGCCCTGCAAGATGTCTTGGCCCAGCGTTGCTTCATGGAGGCTCACTATGGAATGGGCATTGGGTTTTTTGGCTTGGGCCTTTCTTGGCCTGCATAATCTATTATAGTGTCTCCATTAATCTACCAAAGAAGGGTTTGGATTGGGTAGATGGAGAATATGATATCTTAAAATTGGCTCTTGGTTCTTGTGGGACTGTCTCTAACAATGCCGTTTTAAATGATCTTCCTTGA 654 0.448 MVPLSGGHMNPVFTFIAALKGVVTLSRALLYVLAQCIGSIIGFFILKSVMEPKLADTYSLGGCALGDIGQSSGIKPQDALLLEFSCTFLVLFVGLTLAFDKKRCKELGLPMVCLVVAASLALAVFVSITVTGRPGYAGAGLSPARCLGPALLHGGSLWNGHWVFWLGPFLACIIYYSVSINLPKKGLDWVDGEYDILKLALGSCGTVSNNAVLNDLP 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02046 217 SUPERFAMILY Aquaporin-like 3 174 IPR023271 -
Pumo11g02046 217 PRINTS Major intrinsic protein family signature 27 46 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02046 217 PRINTS Major intrinsic protein family signature 162 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02046 217 PRINTS Major intrinsic protein family signature 82 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02046 217 PRINTS Major intrinsic protein family signature 123 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02046 217 Pfam Major intrinsic protein 4 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02046 217 Gene3D Glycerol uptake facilitator protein. 1 184 IPR023271 -
Pumo11g02046 217 PANTHER AQUAPORIN-LIKE 2 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02046 Pumo-Chr11 52488111 52488764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02046 4 180 Major Intrinsic Protein MIP AT4G01470 32.044 8.87e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02046 K09866 - gmx:100797262 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02046 11 52488111 52488764 Pumo11g02046 11 52488111 52488764 ECH