Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02045 ATGGATTCCTCTAATTCCCAAACTGTTGATAATACTGATGAACAATTTCCAAGGCCAGTTCAAAATCATGAGATGTGGAAAGCAGCACTAACAGAATTAACAGCAACTGCCTCTCTAATGTTCACCTTGACAACTTCCATTATTGCATGCTTGGACTCACATGAGGTCGATCCTAAGCTTCTTGTTCCCTTTGCAGTCTTCATCATAGCCTTTTTGTTCCTAGTTGTGACAGTTCCTCTCACGGGTGGCCACATGAGTCCCGTTTTCACATTCATTGCTGCTTTAAAGGGTGTTGTGACTCTTACTCGTGCCCTCATTTACGTGTTAGCACAATGCATTGGCTCAATAATTGGTTTCTTTATACTAAAGTGTGTAATGGAGCCAAAATTAGCCTACACATATTCCTTGGGAGGTTGTGCCATCGATGGCCAAGGAGTGAATTCTGGAATTAAGCCACAGGATGCTTTGTTAGTGGAATTCACTTGCACATTTGTGGTACTCTTTGTGGGTGTCACATTGGCATTTGACAAGAAAAGGTCTAGGGATTTGGGCTTGCCAATGGTGTGCTTGGTGGTGGCAGGAGCAATGGCATTGGCAGTATTTGTGTCCATAACAGTAACTGGGCGGGCCGGTTATGCAGGTGTGGGCCTGAACCCAGCAAGATGCTTAGGCCCAGCATTGCTTCATGGAGGGTCACTTTGGAATGGGCATTGGGTTTTCTGGCTTGGGCCTTTCTTGGCATGTGTAGTCTATTATGCTGTGTCTATCAACCTACCAAAGGAGGGTTTGGTTTGGGTAGATGGAGAATTTGATGTCTTGAAGTTGGCTCTCGGTTCTTGTGGGACTGTCTATAAAACTCCCTTTTCAAATGATCTATCAGAAGAACGCAATGCAGGGTTTCAAGTCCCAGTATGA 915 0.447 MDSSNSQTVDNTDEQFPRPVQNHEMWKAALTELTATASLMFTLTTSIIACLDSHEVDPKLLVPFAVFIIAFLFLVVTVPLTGGHMSPVFTFIAALKGVVTLTRALIYVLAQCIGSIIGFFILKCVMEPKLAYTYSLGGCAIDGQGVNSGIKPQDALLVEFTCTFVVLFVGVTLAFDKKRSRDLGLPMVCLVVAGAMALAVFVSITVTGRAGYAGVGLNPARCLGPALLHGGSLWNGHWVFWLGPFLACVVYYAVSINLPKEGLVWVDGEFDVLKLALGSCGTVYKTPFSNDLSEERNAGFQVPV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02045 304 PANTHER AQUAPORIN-LIKE 23 278 - -
Pumo11g02045 304 Pfam Major intrinsic protein 21 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02045 304 SUPERFAMILY Aquaporin-like 23 251 IPR023271 -
Pumo11g02045 304 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02045 304 PRINTS Major intrinsic protein family signature 27 46 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02045 304 PRINTS Major intrinsic protein family signature 199 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02045 304 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02045 304 PRINTS Major intrinsic protein family signature 238 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02045 304 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g02045 304 Gene3D Glycerol uptake facilitator protein. 1 259 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02045 Pumo-Chr11 52485812 52486940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02045 7 250 Major Intrinsic Protein MIP AT3G53420 27.586 8.17e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02045 K09866 - gmx:100804160 508.064