Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02021 ATGCTTCCTGTCATCAAGAAGCTTATTGCTGGTGGTATTCGCATTTGGGTTTACAGTGGAGATACCGATGGAAGAATTCCCGTGACTGCAACAAGATACACTCTTAGAAAGTTGGGGCTTGGGATTGTTGAAGATTGGACTCCCTGGTATACCAGCAAGCAGGTGGGAGGATGGACCATTGCTTACGATGGGCTTACTTTTGTTACCATAAGAGGTGCTGGTCATCAAGTTCCTACTTTCACTCCCAAGAAAGCTCTGCAGTTGGTTCGACACTTCCTAGCAAATAAGAAATTACCATCTCAACCAATTTAA 312 0.4423 MLPVIKKLIAGGIRIWVYSGDTDGRIPVTATRYTLRKLGLGIVEDWTPWYTSKQVGGWTIAYDGLTFVTIRGAGHQVPTFTPKKALQLVRHFLANKKLPSQPI 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02021 103 Gene3D alpha/beta hydrolase 1 101 IPR029058 -
Pumo11g02021 103 FunFam Carboxypeptidase 1 95 - -
Pumo11g02021 103 SUPERFAMILY alpha/beta-Hydrolases 2 100 IPR029058 -
Pumo11g02021 103 ProSitePatterns Serine carboxypeptidases, histidine active site. 65 82 IPR033124 GO:0004185
Pumo11g02021 103 Pfam Serine carboxypeptidase 1 95 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02021 Pumo-Chr11 52279251 52280490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02021 11 98 Calmodulin-binding Proteins AT2G22960 32.584 1.58e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02021 K16297 - gmx:100781503 213.772