Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02005 ATGGACTCCACATTAGACTTGGATGATGTTATTATTCATTATGATGCTTCGAATCTTCCAAGTTTGCATAAGGAGGACAAGACAACACACAAGGAGCACCAGCACTACACCGTTTTGAGCGAATCCGACATCAGGCGACATCAAGACGCAAACATCAACCAGGTTTCGCACGTTCTCTTGATATCAATGGTTTCTGCTTGCCTTTTGCTCATCCACCACGAGTGGAGTGTGCTCAAAGTGCACGAAGTATGGTTTGATGATGAAGAAAGAGTTCGCAGAGCTGTAGGGTTGTTAAAGCAGCATGAACCCCAGATCAGCTGGTTGTGTCATCTATATTGCATCCCTTGCTGGAAGAAGTACGTGGATACAAGCATCAACGAGGGCACTGATAAGTGCTTGAAACTTAGATGCCCTCAACCCTCTTGTGATGCAGCTGTGGGTGGAGACATGATTCGCAAACTTGCAAGTGAGTCAAAGAGGAACAAGAATGATCATGAATCATATGTGAACACTGCTTCCATTCTTACTAATACCAAATCTTGTCCTGAGTGCAAGAAACCTATTGAGAAAATCAACAGGTACATGCACATGGAATGCGAGTGTGGGTTCCAATTTTGTTGGTTATGTCTTCGAGAATCGTCCAAGTGCTGTTATAGCTGCGTCCATTTTCCTGACAAGGATATTTACAAGAAGGAAGTGGAGAGAAATGTGGTGCTTAATTATTTGGAGGATCGCACTCATTGTTATAAGCGTTGGGTCAACAATGATTTGTCAAGAAAAAATGTGCTTAATCATCTAATGTTCTTGATGAATGGTGGGCATACAAAGAGACTGAGTATGTTATATCGAAGGTTAGAAGATGATTTTGAGTTCATAAAGGTAGCGTGGCAACAAGTGGTTGAGTCTATAAGAGTGCTCAAATGGACTTATCCATATGGATTCTATCTCCCTCAGAGTGAACAAGCTAAAAGGGAGTTTCTTGAGTACTCACAACGTGAGGCTGAAGTTGTTTTGGAAAAGCTTTGTCATTGCGCAAAGAAGGAACTAGGGGAGTTTATTTATGCTAATAAGCCAAAAGAGACATTTGATAATTTTCGTTGGAAGTTAATGGAACTTACCCGTGTCACTAAGGCTTATTTTGAGAATCTGGTGAAAGCCTTAGAGAATGGGCTGACTAGTGTGCATGTAAAAAAATATGTTGGAGTCAGTGGAATGAAAAGAGAGTCAAAGGAGACAGGGGAAAGCTCATCTGGAAAGAAAATGAGAAGTTGA 1272 0.4135 MDSTLDLDDVIIHYDASNLPSLHKEDKTTHKEHQHYTVLSESDIRRHQDANINQVSHVLLISMVSACLLLIHHEWSVLKVHEVWFDDEERVRRAVGLLKQHEPQISWLCHLYCIPCWKKYVDTSINEGTDKCLKLRCPQPSCDAAVGGDMIRKLASESKRNKNDHESYVNTASILTNTKSCPECKKPIEKINRYMHMECECGFQFCWLCLRESSKCCYSCVHFPDKDIYKKEVERNVVLNYLEDRTHCYKRWVNNDLSRKNVLNHLMFLMNGGHTKRLSMLYRRLEDDFEFIKVAWQQVVESIRVLKWTYPYGFYLPQSEQAKREFLEYSQREAEVVLEKLCHCAKKELGEFIYANKPKETFDNFRWKLMELTRVTKAYFENLVKALENGLTSVHVKKYVGVSGMKRESKETGESSSGKKMRS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02005 423 Gene3D - 153 394 - -
Pumo11g02005 423 SUPERFAMILY RING/U-box 167 223 - -
Pumo11g02005 423 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 173 309 IPR031127 GO:0004842|GO:0016567
Pumo11g02005 423 SUPERFAMILY RING/U-box 110 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02005 Pumo-Chr11 52143527 52147228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02005 31 395 ARIADNE family AT1G65430 37.367 2.40e-77 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02005 K11968 - gmx:100801350 488.034