Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01959 ATGGTAGCGATCATGCAACAGCAGCAGCAGCAGCAACAGCAGAACCCCTCTGCACTGGTGCCACCACAGCTCAAGAATCCCCAATCTTCCGCCGCCGCCGCCACCACCACCGCCACCGCCTCCATTAGGTCACCCTCCGGCCAGTCGCAGCTATCGTCGCCGCTCTCCGTGGTCCCGCCCCTTCGGCAACCCCCTCTCTCCTCGCATCCGGTGCCGGTTACGGCGGTGGAGCCCGCTCTGACGGCTGTGCCGACGTGTCCGCTGGTCAGAGTCCGGCTCTCGGACATTGCCCCCTATGACGGAGCACCGGCGGGGCCGTATCTGAGAGCAATGGAGGCACTGTGCGGGTCTCTGTTGCGGCACAATGCTGCGTTGATCGAATTGGGGAGCGAAGACACTGCTCTGATGCGATGCGGCTTGGAAGGTGCGAGGTTGTTTTTCAGAAGTAGGGCCCACCTTGGTGCTGGCAAGGGTAGCCGTGGGGTTTACATGTACAGAGCAGGAAGGGCTTTGGAGGATTGGGATTCTTCTCCCCCTTGCATGGCTGATATTTTTAGGTGCATGGGAAAGGCGTCTCGATCCGCCTTGTGTGCCATTGCGAGGCATCTACGTCTTAGAAGCGATGTTTTTAACCATTTGCTTGATGATGCTCCATTGCCTGCTAATGAGGTGTCTTCGTCAGTTCTTGTTGTGACCTACTCACACGCTTCTTTGCAAAATGGAAGAGGTGCTATTGGAGGCGGTAAGCCTTCCATGAACGGTGAAGTTGAGAAGGGATTGTTGACGTTGATATCTTCTGACACTCCTGGTCTTCAGGTATGTGACCCCAGTGGTCGCTGGTATCTGGCAGACAGTGGTTCTGGGCCTGGAGATCTTTTACTGATAACAGGCAAGGCACTTAGCCATGCTACTGCTGGCCTATGTCCTGCTGCATCATATAGAGCTTCTCCTGATTATTTTCTGAGTCCTAATGGTGGAGGCAGGACTTCTCTTGCATATAGACTCATGCCACAGGGCAATGCTATATTAGATTGTTCCCCAATTGCAGCAGCTGGCCATGTTATTCCCCAAAGCTATGTTCGAATATCTGTAAGCCAATTTATGGATGACCTTGCTGCCGAAGAACTGATAGGCAGCAGATGTGATAATGCTGATGTTGCTACTCAAAACAATGTGAATAAGGAGCCATCATTAAGAAGTGTTCTATCAGATCCTTTATCTGGCACATTCCTTGAAGATGCCATGCTTGTCTCATGTGGACATTCTTTTGGTGGTCTTATGCTGAGGAGAGTCATTGAAACGTCAAGATGTACTCTCTGCAATGCAGAAATTGAAACTGGTTCTTTGATCCCTAATCTTGCTCTTAGAGCTGCAGCTGCTGCTGTCAAGCATGAGGACGATCGGAGGTTATTTCGTAATGCTGCTCTCCGAAAGCGGCGGAAAGAAATGGGTGACCAAATGGATTCAATGAGAAGAGTGAATAGGGAAAATGGAGATTTTACTGCTGCCGATGGACTTCAGCGGGGAGTACAATATCCATTTTCAGTAAATGAGAAAGTTGTTATTAAGGTAAACATTTTCGGTTTTACCTTTTCAATTTTTTGGCAATTAATGTATCCAATGATAAGCGGAATCAAGAACAACCAATTTCTACAGGGTAACAGAAGAACACCAGAAAAATTTGTTGGGAAAGAAGCTGTTATTACATCTCAGTGTCTCAATGGCTGGTATTTGCTCAAGATTATTGAAACTGGAGAGAATGTCCGCCTGCAGTACCGTTCTCTCAGGAAGCTCTTGAACTCACCAGCGGACCAGTGTCCCTCACAGCCAATTCAAAATAGCAGCTCTTAA 1851 0.4932 MVAIMQQQQQQQQQNPSALVPPQLKNPQSSAAAATTTATASIRSPSGQSQLSSPLSVVPPLRQPPLSSHPVPVTAVEPALTAVPTCPLVRVRLSDIAPYDGAPAGPYLRAMEALCGSLLRHNAALIELGSEDTALMRCGLEGARLFFRSRAHLGAGKGSRGVYMYRAGRALEDWDSSPPCMADIFRCMGKASRSALCAIARHLRLRSDVFNHLLDDAPLPANEVSSSVLVVTYSHASLQNGRGAIGGGKPSMNGEVEKGLLTLISSDTPGLQVCDPSGRWYLADSGSGPGDLLLITGKALSHATAGLCPAASYRASPDYFLSPNGGGRTSLAYRLMPQGNAILDCSPIAAAGHVIPQSYVRISVSQFMDDLAAEELIGSRCDNADVATQNNVNKEPSLRSVLSDPLSGTFLEDAMLVSCGHSFGGLMLRRVIETSRCTLCNAEIETGSLIPNLALRAAAAAVKHEDDRRLFRNAALRKRRKEMGDQMDSMRRVNRENGDFTAADGLQRGVQYPFSVNEKVVIKVNIFGFTFSIFWQLMYPMISGIKNNQFLQGNRRTPEKFVGKEAVITSQCLNGWYLLKIIETGENVRLQYRSLRKLLNSPADQCPSQPIQNSSS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01959 616 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 550 613 - -
Pumo11g01959 616 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 466 IPR013083 -
Pumo11g01959 616 SUPERFAMILY Clavaminate synthase-like 180 347 - -
Pumo11g01959 616 MobiDBLite consensus disorder prediction 1 70 - -
Pumo11g01959 616 Gene3D - 155 373 IPR027443 -
Pumo11g01959 616 MobiDBLite consensus disorder prediction 1 57 - -
Pumo11g01959 616 SUPERFAMILY RING/U-box 398 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01959 Pumo-Chr11 51469032 51478163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01959 398 613 Plant U-box Gene Family AT5G05230 33.641 2.16e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01959 - - gmx:100807199 1040.8