Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01950 ATGTTCTGTACTTGCAAGACAACGCCGTTCACGGGACGCATTCCCGGTTTCAACCAAAGCAGCCTCAGGTATTTAAATGTCTCCAACAACCGGCTCTCCGGCAGGATTCCGGAGACCTCGGCATTGATCCGGTTCAATGCGTCGTCGTTTTCGGGGAACCCAGGGCTATGCGGGGAACAGATCCAACAAGCATGCAAAAACGGCAGCGGTTCATTGCCGCCATCGATAAGCCCTAGTTATCCGTTAATACCGGGAGGAACAATGACGATGGGGAAAACGTCCACGTCATCGAACCGCACGAAATTGATAAAAATAATTGGAGGGACTGTTGGTGGAGTTGTTTTGGTTCTCGTGTGCATGCTTGTGGTGTGGGCGATTTGCAAGAAGAAGAGGACGAGGGTGGGTTCTGGAACGAGGAGCAAGGGTGGTGCTGACGTGGCAGAAGGGGAAATTGGTGCGGCAGGAACAGCGGGAGGAGAAGGAGGGGATAATAAGCAACAACAAGAAGGGGGTTTTGCGTGGGAAAGTGAGGGTCTAGGGAAGCTGGTGTTCTGCGGAGGAGGGGATCGCGAGATGAGTTATAGTTTGGAGGATTTGCTCAAGGCTTCGGCGGAGACTTTGGGGAGGGGTATTATGGGAAGTACGTATAAGGCAGTCATGGAATCTGGGTTCATTGTTACTGTGAAGAGGTTGAAAGATGCTAGGTACCCTGGGTTGGAAGAGTTCAGGGCTCACATTGAAGTCCTTGGGAGGCTCACCCACCCTAACCTGGTCCCACTCAGGGCTTATTTCCAGGCTAAGGAGGAACGCCTTCTTGTATATGATTACTTTCCCAATGGCAGCCTCTTCTCCCTTATTCACGGATCAAAAACATCTGGTGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAAATTGCTGAAGATCTAGCAACAGGCCTGCTATATATCCACCAGAACCCTGGCTTGACACATGGAAACCTGAAATCTTCTAATGTATTGCTGGGTTCTGACTTTGAGTCATGTCTTACTGATTATGGTCTCACTGTGTTCCTTAATCCTGAGTCAATGGATGAGCCTAGTGCCACTTCTTTATTCTATAGAGCACCGGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCAGCTGATGTATACAGTTTTGGGGTCCTTCTTCTTGAGCTTTTGACAGGCAAAACACCCTTCCAAGACCTTGTTCAGACATACGGTTCAGACATACCTAGTTGGGTTCGGTCAGTGCGCGAAGAAGAGACAGAATCCGGGGATGATCCTGCCTCAGGCAATGAAGCATCTGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGGCATGTGTTTCACTAGTGCCAGAAAATAGGCCTACGATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGGGGAGGCTCATGTCTCATCTAACAGTAGTGATCACTCCCCTGGTAGATGGTCAGATACTGTTCAAAGCTTTCCAAGGGAAGAACACCAGAGCATATGA 1521 0.4892 MFCTCKTTPFTGRIPGFNQSSLRYLNVSNNRLSGRIPETSALIRFNASSFSGNPGLCGEQIQQACKNGSGSLPPSISPSYPLIPGGTMTMGKTSTSSNRTKLIKIIGGTVGGVVLVLVCMLVVWAICKKKRTRVGSGTRSKGGADVAEGEIGAAGTAGGEGGDNKQQQEGGFAWESEGLGKLVFCGGGDREMSYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIEVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPESMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLLLELLTGKTPFQDLVQTYGSDIPSWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSFPREEHQSI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01950 506 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 475 IPR046959 -
Pumo11g01950 506 Gene3D Phosphorylase Kinase; domain 1 188 276 - -
Pumo11g01950 506 MobiDBLite consensus disorder prediction 477 506 - -
Pumo11g01950 506 SUPERFAMILY L domain-like 9 59 - -
Pumo11g01950 506 MobiDBLite consensus disorder prediction 134 168 - -
Pumo11g01950 506 Pfam Protein kinase domain 204 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01950 506 ProSiteProfiles Protein kinase domain profile. 201 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01950 506 SUPERFAMILY Protein kinase-like (PK-like) 205 481 IPR011009 -
Pumo11g01950 506 MobiDBLite consensus disorder prediction 480 506 - -
Pumo11g01950 506 Gene3D Transferase(Phosphotransferase) domain 1 277 493 - -
Pumo11g01950 506 ProSiteProfiles Leucine-rich repeat profile. 21 43 IPR001611 GO:0005515
Pumo11g01950 506 Gene3D Ribonuclease Inhibitor 6 71 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01950 Pumo-Chr11 51388399 51394170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01950 10 506 Receptor kinase-like Gene Family AT1G60630 62.103 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo11g01950 Pkinase 4.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01950 - - gmx:100820186 823.157