Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01946 ATGGCGGCTACTGTGTCTGCGTGGTCAAAGCCCGGCGCGTGGGCCTTGGATTCCGAGGAACACGAAGCCGAACTCCTTCAACAGACCAACCCCAACGGCAAGCCACTCGCCGACTTCCCCTCCCTCGCCGTCGCCGCCGCCGCCAAGCCCAAGAAGAAGAAGGCCCAGACCTATTCCCTCGCCGAGTTCACCGCCAAGCCCGACGCCGCCTTCGCCGACCAAGATCCCGTCCTCCTCCCCACCGGCCCGCGCCAGCGCACCGCCGAGGAGCTCGACCGCACCCGCCTCGGTGGCGGCTTCCGCAACTACGGCGACCGCCCCCATAGGAACAACAACTCCTCCGGCAGCGACGACTCCTCCAATTCCCGCTGGGGTTCATCTAGGGTTTCCGACGAGCCCAGGCGAAACGGTTCTTTTGGGGCTAGGGATTCGAATCGTGAGTTGCCCCCTTCACGCGCCGATGAAACTGATAATTGGGCTGCCGCGAAGAAACCCTCTGTGGGGTTCGAGAGGAGGGAGAGGGACAGAGGAGGGTTTTTCGATTCGCAGTCGCGCGCGGACGAATCTGAGAGCTGGGTTTCGAATAAGAGCTTTGTGCCGTCGGAGGGGCGGAGATTTGGCTCCAACGGCGGCGGCGGCGGCGGCTTTGAACGAGAGAGGAGGGTTGTTGGGTTTGGCTCCAGCGGCGGCGCGGATTCCGACAATTGGAACAAGAAGAAGGGCGAGTCCAACGTTGTTGGTAGCGAGAGCGGTGGTGGGAGGCCGAGGCTTGTGTTGCAACCTCGGACACTGTCGGTGAGCAATGAAGGGGGTGATGTGGGGAAGCCTAAAGGGGTTAATCCGTTCGGAGAGGCGAGGCCGAGGGAGCAGGTTTTGGCGGAGAAAGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCATGAAGATTAAGGAGAAGGAGACAACTGGTGCTGATGGCTTTGGGAAGAGGGGTTTTGGCTCTCCCAACGGTGGAGGACGTCCTACTGCTACTTTGCCTGAAAGTCGCACTGAGAGGAGTTGGAGGAAGCCCCAACAATCTGATGATGATCGTCCCAACAGTGCTGAGAAAGTGGAAGAAGAACAACACGTTGAAGAAAATTGA 1128 0.5984 MAATVSAWSKPGAWALDSEEHEAELLQQTNPNGKPLADFPSLAVAAAAKPKKKKAQTYSLAEFTAKPDAAFADQDPVLLPTGPRQRTAEELDRTRLGGGFRNYGDRPHRNNNSSGSDDSSNSRWGSSRVSDEPRRNGSFGARDSNRELPPSRADETDNWAAAKKPSVGFERRERDRGGFFDSQSRADESESWVSNKSFVPSEGRRFGSNGGGGGGFERERRVVGFGSSGGADSDNWNKKKGESNVVGSESGGGRPRLVLQPRTLSVSNEGGDVGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESMKIKEKETTGADGFGKRGFGSPNGGGRPTATLPESRTERSWRKPQQSDDDRPNSAEKVEEEQHVEEN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01946 375 MobiDBLite consensus disorder prediction 288 320 - -
Pumo11g01946 375 MobiDBLite consensus disorder prediction 230 244 - -
Pumo11g01946 375 MobiDBLite consensus disorder prediction 106 133 - -
Pumo11g01946 375 MobiDBLite consensus disorder prediction 135 159 - -
Pumo11g01946 375 Pfam Plant specific eukaryotic initiation factor 4B 7 311 IPR010433 GO:0003743
Pumo11g01946 375 MobiDBLite consensus disorder prediction 166 183 - -
Pumo11g01946 375 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 366 IPR010433 GO:0003743
Pumo11g01946 375 MobiDBLite consensus disorder prediction 69 375 - -
Pumo11g01946 375 MobiDBLite consensus disorder prediction 184 202 - -
Pumo11g01946 375 MobiDBLite consensus disorder prediction 344 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01946 Pumo-Chr11 51356958 51359265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01946 1 351 Eukaryotic Initiation Factors Gene Family AT4G38710 51.889 1.56e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01946 - - gmx:100820014 552.362