Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01935 ATGGGTACCACTACAACCTTTCCGTCTTCCGGTGTTTCAACCACCAGCAAATGGCTGGGCTTCGTGGCGGCCGTCTGGATTCAATGCATCTCCGGCAACAACTACACTTTCTCCAACTACTCCGACGCGCTCAAATCTCTCATGTACCTCACGCAGGTCGAGCTCAATAACCTCTCCGTCGCTAAAGATGTTGGCAAAGCCTTTGGGCTTCTGGCTGGCCTCGCCTCCGACCGCTTCCCCACTTGGGCCATTCTCCTCATAGGCTCCGTCGAAGGCCTAATAGGCTACGGAGCCCAATGGCTCGTTGTTAGCCAGAGAATTCAGCCCCTTCCCTACTGGCAGATGTGTGTATTTTTGTGCATGGGAGGGAACAGCACGACGTGGATGAACACTGCCGTTTTGGTAACTTGCATACGAAACTTTCGTTCCAACAGAGGACCAGTTTCGGGTATTTTGAAAGGCTTTGTAGGGTTGAGCACTGCGATATTCACTACCCTCTGTTCTGCTCTCTTCGCTGATGACCCTGGCTCTTTCCTCATCATGCTCTCTGTGGTTCCCTTCGCCGTTTGTCTCACCGGTATGTTTTTCCTCCGCGAGATTCCTCCAGCCGCCGGCGGAGACGGTGAGGAGGTAAAGTACTTCGGCGTCTTCAACGTGGTGGCGGTCCTGGTGGCGGTTTTTCTGTTAGTATATGGGTTCGTCCCCAGTCCCAGCATGTTGGTGTCGCGAGTGTTCGTTGCCGTTTTGGTGGTTATGCTGGGTTCGCCGTTGGGGATCCCGGTTTACTCATATTTGAGGGACCGGTTGAGAGAGGGGAATGATTTGGAGGGGCAGAGGGTGAAGGAACCGTTGGTGCAGGAGAACGAAACTGTGGCGGAGGAAGCAGAGATAGTGATAGTGAAGAGGACGCCGGTGGTAGGTGAGGAGCACACGATAATGGAGGCGGTGAAGAGCGTGGATTTTTGGATCTTGTTCGTGTCGTTTCTGTGTGGGGTTGGAACGGGTTTGGCTGTGATGAACAATATGGGTCAAATCGGGTTAGCGCTAGGTTACCCGGATGTCTCGCTATTTGTGTCCTTGACCAGCATTTTTGGTTTCTTTGGACGAATCATCTCGGGCACCGTTTCGGAGTTCACTATCAAGAAAGCTGCAACACCAAGACCTCTTTGGAATGCAGCATCTCAGCTTCTAATGGCTGTAGGTTACATACTCCTAGCCATGGCTATGCCAGGTTCCCTATACATTGGGTCTATTTTAGTTGGCATATGTTATGGAGTGAGGCTTGCCATTACAGTCCCAACAGCCTCTGAGTTATTTGGACTCAAATATTATGGTCTCATCTACAATATTCTCATCCTTAACCTTCCCCTGGGCTCTTTCCTTTTCTCTGGGTTGCTTGCTGGCATACTCTATGATATGGAGGCAACAACAACTGAGGGAGGAGGCAACACCTGTGTTGGAGGTCATTGTTACAGGCTAGTCTTTATAATCATGACTGGAGCATGTATTGTTGGTTTCTTCTTAGACATTCTATTGTCAATCAGAACCAAGAATATTTACACCAAGATTTCCACGAGCAAGAAACCCAAGAAATCCTTAGCAACATCGAATAGCCGGTGA 1620 0.5006 MGTTTTFPSSGVSTTSKWLGFVAAVWIQCISGNNYTFSNYSDALKSLMYLTQVELNNLSVAKDVGKAFGLLAGLASDRFPTWAILLIGSVEGLIGYGAQWLVVSQRIQPLPYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRSNRGPVSGILKGFVGLSTAIFTTLCSALFADDPGSFLIMLSVVPFAVCLTGMFFLREIPPAAGGDGEEVKYFGVFNVVAVLVAVFLLVYGFVPSPSMLVSRVFVAVLVVMLGSPLGIPVYSYLRDRLREGNDLEGQRVKEPLVQENETVAEEAEIVIVKRTPVVGEEHTIMEAVKSVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYPDVSLFVSLTSIFGFFGRIISGTVSEFTIKKAATPRPLWNAASQLLMAVGYILLAMAMPGSLYIGSILVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTEGGGNTCVGGHCYRLVFIIMTGACIVGFFLDILLSIRTKNIYTKISTSKKPKKSLATSNSR 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01935 539 Gene3D MFS general substrate transporter like domains 42 274 IPR036259 -
Pumo11g01935 539 Gene3D MFS general substrate transporter like domains 314 518 IPR036259 -
Pumo11g01935 539 SUPERFAMILY MFS general substrate transporter 32 518 IPR036259 -
Pumo11g01935 539 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 18 521 - -
Pumo11g01935 539 Pfam Nodulin-like 17 261 IPR010658 -
Pumo11g01935 539 CDD MFS_Mch1p_like 16 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01935 Pumo-Chr11 51177964 51182217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01935 17 532 Nodulin-like Gene Family AT4G34950 68.796 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01935 - - gmx:100800237 899.427