Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01917 ATGGTTTTCTGTAACTCTATTAGGGTCTTTCCGGGAAAAGACATTGGTGAATGTCAAGGTTCATATTGGTATAAGATGAAGGTGGCAAGTCTGGTGATGATGAAAAGGGTTTCCTTCCAGTGGTGGTTTAGAGTGGCTGTGCAGCTCAGCTTAATCTTGATCGGTGCATGTTCTGATAGAGTCTCATTTAGAAAAATCATATCTCCACTTCAATTTTCCAAGCAAGGAAGCGATGAAAACTTTGTGAGAAAAGCTTCGACGCCTCCTTCTTCTCCACCAGTCAAGTTGGATACCGACAATCCTCAGCAGGTGGTGATTGACAATGGCATCGTTTCCCTCAATTTGTCAAAGCCCGAGGGCTATATCATTGGAATATATACTGGAATTGACAATTTACTTGAGCCTAAAAATAAAGAATACGATAGAGGGTACTTGGACGTTGTTTGGAATGAACCAGGAAAATCTGGCATGTTTGAGAGAAACGAGAATATAGTGGAGGTTCATTTTCAGAACATGGACAACTTCCATGAAAGGCTCAGTGTCCCCATAAACATAGACCAAAGGTATATATTGCGAAAAGGTGATTCTGGGTTTTATTCTACGCAATATTTAATCGACCAACAGGATTACCTGCGTGGAGGTTGA 645 0.4109 MVFCNSIRVFPGKDIGECQGSYWYKMKVASLVMMKRVSFQWWFRVAVQLSLILIGACSDRVSFRKIISPLQFSKQGSDENFVRKASTPPSSPPVKLDTDNPQQVVIDNGIVSLNLSKPEGYIIGIYTGIDNLLEPKNKEYDRGYLDVVWNEPGKSGMFERNENIVEVHFQNMDNFHERLSVPINIDQRYILRKGDSGFYSTQYLIDQQDYLRGG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01917 214 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 97 203 - -
Pumo11g01917 214 MobiDBLite consensus disorder prediction 79 98 - -
Pumo11g01917 214 Pfam Rhamnogalacturonate lyase family 83 202 IPR010325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01917 Pumo-Chr11 50962960 50969852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01917 104 200 Polysaccharide Lyase AT1G09910 47.273 6.44e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01917 K18195 - gmx:100781089 192.971