Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01915 ATGGACGACGGGGAGCTTGATTTCTCGCAGCAGGAAGTGTTTTCGAGTCCGAACATGGGGGAGCTTCCGAGCAGCGGTTCAATGGACAGTTTCTTCGACGAGCTTCTCAAGGACACGCACGCGTGCACTCACACCCACACGTGCAACCCTCCCGGCCCCGATTTTTCCCACACCCACACGTGCTACCACGTCCACACCAAAATCGTCCCCGCCCCTGCGGAGGACCAGGTCGCCACTGACGACACTGCCGAGTCCGCCGAGAAGAAGTCGTCGAAGAAGCGCCCTCTGGGGAACAAAGAGGCCGTTCGCAAGTACCGCGAGAAGAAGAAGGCGCGTGCAGCCTCGCTGGAGGACGAGGTTGTTAAATTGAGGGCTCTGAACCAACACTTGATGAAGAAGCTTCAGGGGCAGGCTGCTCTGGAGGCCGAAATCGCGAGGCTCAAGTGTTTGCTGGTTGACATAAGGGGGAGGATTGAAGGGGAAATTGGATCCTTTCCCTATCAGAAAACAACTCCGAATGCGAATCCCCCGATAGCTAACTTGCCTGGTTCTTATGTGATGAACCCTTGTAACTTGCAGTGTGATGATCGGGTGTATTGCCTTAACCCTGATGGAAAGATTGGGGAGAGTGCGGCTTTGAATGAGGAAGGGTTTGGTGGTTGTGAATTTGAGAACCTGCAGTGTCTAGGAAGCCAGAATTTGGGGCTCAAGGATCTTCGCGCTTGTGGGGTTGGAGTACAGACAGGGTCTAATGTAAATTCTTCTGCTTCAAATAAAAGAAAAGGGGGATCTCGTGCCGCAACAGCTGGTTGA 813 0.5375 MDDGELDFSQQEVFSSPNMGELPSSGSMDSFFDELLKDTHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAPAEDQVATDDTAESAEKKSSKKRPLGNKEAVRKYREKKKARAASLEDEVVKLRALNQHLMKKLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKTTPNANPPIANLPGSYVMNPCNLQCDDRVYCLNPDGKIGESAALNEEGFGGCEFENLQCLGSQNLGLKDLRACGVGVQTGSNVNSSASNKRKGGSRAATAG 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01915 270 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 166 IPR031106 GO:0003700|GO:0006351
Pumo11g01915 270 MobiDBLite consensus disorder prediction 1 26 - -
Pumo11g01915 270 Gene3D - 77 154 - -
Pumo11g01915 270 SUPERFAMILY Leucine zipper domain 93 136 IPR046347 GO:0003700|GO:0006355
Pumo11g01915 270 MobiDBLite consensus disorder prediction 9 25 - -
Pumo11g01915 270 Pfam Basic region leucine zipper 89 143 IPR004827 GO:0003700|GO:0006355
Pumo11g01915 270 CDD bZIP 92 145 - -
Pumo11g01915 270 SMART brlzneu 86 153 IPR004827 GO:0003700|GO:0006355
Pumo11g01915 270 MobiDBLite consensus disorder prediction 72 103 - -
Pumo11g01915 270 Coils Coil 99 133 - -
Pumo11g01915 270 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01915 Pumo-Chr11 50927673 50930698 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01915 1 269 bZIP Transcription Factor Family AT2G16770 64.207 1.07e-117 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo11g01915 bZIP_2 6.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01915 K25785 - gmx:780549 467.618