Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01908 ATGGATGGCTCATTTGTACGGCCATATGTCAGTTCTTTGAGTGTAGAAGCAAAAACAATGGGTTTTCGCTTACTTGGAAGACGGACATCATTTACAAGCCAAGCAGCTAGCAAGATTGCAAAAGGCTATGTTGCAGTTTATGTTGGAGAGAAAATGAAGAGGTTCATGATTCCCATATCATTCTTGAATCAACCTTTATTTCAAGAATTGCTAAAACAAGCTGAAGACGAGTTCGGCTACGATCATCCTATGGGAGGTCTTACAATTCCCTGCAAGGAAGATGTGTTCCTAGATATAGCTTCTCGCTTGAACGTGCTATAA 321 0.405 MDGSFVRPYVSSLSVEAKTMGFRLLGRRTSFTSQAASKIAKGYVAVYVGEKMKRFMIPISFLNQPLFQELLKQAEDEFGYDHPMGGLTIPCKEDVFLDIASRLNVL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01908 106 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 33 103 IPR003676 GO:0009733
Pumo11g01908 106 Pfam Auxin responsive protein 30 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01908 Pumo-Chr11 50845128 50845918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01908 29 96 Calmodulin-binding Proteins AT3G43120 47.059 2.46e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01908 K14488 - gmx:100806671 133.265