Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01907 ATGGGTTTTCGCCTACCTGGTATCAGAAAGGCATCATTTGCTGCAAACCAAGCATCTTCAAAATCAGTGGATGTGCCAAAGGGATACCTTGCAGTCTATGTTGGAGAGAAAATAAAGCGGTTTGTGATCCCCATATCATACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCTGAGGAAGACTTCGGGTATGACCATCCAATGGGTGGTCTCACAATTCCTTGCGGAGAAGATGTGTTCTTAGATACCATTTCTCGCTTGAATAGAACATTCTCTTCTCAAGTCTCAACACATAAAACAATGGGTTTTCGTTTACCTGGTATCAAAAAGGCATCATTAAACAAAGCTTCTTCAAAAGCTGTGGACGTGCCAAAGGGCTACCTTGCAGTCTATGTTGGAGAGAAAATGAAGAGGTTTGTGATCCCCTTATCATACTTGAAGCAAACTTCATTTCAAGACTTGCTGAGTCTAGCCGAGGAAGAATTTGGGTATAAACATCCAATGGGTGGTCTTACAATTCCTTGTGGAGAAGACGTGTTCTTAGATATCACTTCTCGCTTGAATTAA 573 0.4119 MGFRLPGIRKASFAANQASSKSVDVPKGYLAVYVGEKIKRFVIPISYLNQPSFQDLLSQAEEDFGYDHPMGGLTIPCGEDVFLDTISRLNRTFSSQVSTHKTMGFRLPGIKKASLNKASSKAVDVPKGYLAVYVGEKMKRFVIPLSYLKQTSFQDLLSLAEEEFGYKHPMGGLTIPCGEDVFLDITSRLN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01907 190 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
Pumo11g01907 190 Pfam Auxin responsive protein 109 188 IPR003676 GO:0009733
Pumo11g01907 190 Pfam Auxin responsive protein 12 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01907 Pumo-Chr11 50839579 50842848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01907 17 82 Calmodulin-binding Proteins AT3G43120 51.515 9.38e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01907 - K14488 gmx:112997918 253.832