Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01906 ATGGGTTTTCGTCTACCTGGTATCAGAAAAGCAGCCTTTACTGCAAACCAAGTATCTTCAAAAGTTGTAGATGTGCCAAAGGGTTACATTGCAGTCTATATTGGAGAGAAAATGAAGCGGTTTGTGATCCCCGTATCATACTTGAACCAACCTTTATTTCAAGATTTGTTGAGTCAAGCTGAGGAAGAATTTGGGTATGACCATCCAATGGGTGGTCTCACAATTCCTTGCAGAGAAGATGTGTTCTTGGATATTACTTCTCACTTAAATCGGTGCTAA 279 0.4014 MGFRLPGIRKAAFTANQVSSKVVDVPKGYIAVYIGEKMKRFVIPVSYLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCREDVFLDITSHLNRC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01906 92 Pfam Auxin responsive protein 15 87 IPR003676 GO:0009733
Pumo11g01906 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01906 Pumo-Chr11 50836489 50837012 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01906 9 92 Calmodulin-binding Proteins AT4G34750 41.667 3.52e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01906 - K14488 gmx:112997918 161.77