Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01905 ATGGGTTTTCGTTTACCTGGTATGAGAAAGGCATCCCTTGCTGCAATCCAAGCATCTTCAAAAGTCGTGGATGTGCCAAAGGGACACCTTTCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTGTATCATACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCTGAGGAAGAATTCGGGTATGACCATCCAATGGGTGGTCTCACAATTCCTTGCAGAGAAGATGTGTTCTTAGATACCACTTCTCGCTTGAATAGGTGCTAA 279 0.4337 MGFRLPGMRKASLAAIQASSKVVDVPKGHLSVYVGEKMKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCREDVFLDTTSRLNRC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01905 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 16 89 IPR003676 GO:0009733
Pumo11g01905 92 Pfam Auxin responsive protein 17 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01905 Pumo-Chr11 50833569 50833944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01905 24 82 Calmodulin-binding Proteins AT3G43120 54.237 1.21e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01905 K14488 - gmx:100795597 172.94