Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01904 ATGGGTTTCCGTTTACCTGCTATTCGACGGGCATCATTCAACGCTAACCAAGCAGCTTCCAAATCAGTAGAAGTTCCAAAGGGCTATCTTGCCGTGTATGTTGGAGAGAAACATAAGCAGTTTGCGATCCCTGTGTCATACTTGAACCAACCTTCATTCCAAGAGTTGTTGAGTTACGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGACGTCTTCCAACATATAACTTCTCGCTTGAATGGACAATAA 279 0.448 MGFRLPAIRRASFNANQAASKSVEVPKGYLAVYVGEKHKQFAIPVSYLNQPSFQELLSYAEEEFGYDHPMGGLTIPCSEDVFQHITSRLNGQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01904 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
Pumo11g01904 92 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01904 Pumo-Chr11 50831654 50831932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01904 24 85 Calmodulin-binding Proteins AT3G43120 51.613 2.70e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01904 K14488 - gmx:100816803 171.4