Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01901 ATGGGTTTTCGTTTACTTGGTTTTAAAAGAGCTAGACAAGCGGCATCAAAGGGTGAGGAGGTCCCAAAAGGGTATCTTGCAGTCTATGTTGGAGAAACAATGAAGCGGTTTATAATTCCAATTGGATACTTGAACCAACCTTCATTTCAGGACTTGCTAAGCAAAGCAGAAGAAGAATTTGGGTACCATCATCCCTTGGGTGGCCTTACAATTCCTTGCAGAGAAGATGTCTTCTTAAATATCATGTCAGTTATCTCTTGA 261 0.4061 MGFRLLGFKRARQAASKGEEVPKGYLAVYVGETMKRFIIPIGYLNQPSFQDLLSKAEEEFGYHHPLGGLTIPCREDVFLNIMSVIS 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01901 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 83 IPR003676 GO:0009733
Pumo11g01901 86 Pfam Auxin responsive protein 12 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01901 Pumo-Chr11 50802253 50802513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01901 4 85 Calmodulin-binding Proteins AT3G43120 44.944 8.86e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01901 K14488 - gmx:112998583 151.754