Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01897 ATGGGTTTTCGTTTACCTGGTATCAGAAAGGCATTATTTGCAGCCAATCAAGCATCTTCAAAAGCGGTGGATGCCCCAAAGGGCTACCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTGTGTCATACTTGAACCAACCTTCATTCCAGGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGAGCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATCTCAAGTCTCTAAAACAATCAATACAAACAATGGGTTTTCGTTTACCTGGTATCAGAAAGGCATTATTTGCAGCCAATCAAGCATCTTCAAAAGCGGTGGATGCACCAAAGGGCTACCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTGTGTCATACTTGAACCAACCTTCATTTCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTTAGATATGAGCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCCGACGTATAACTTCTTGCTTGAATGGACAATAA 549 0.4408 MGFRLPGIRKALFAANQASSKAVDAPKGYLAVYVGEKMKRFVIPVSYLNQPSFQDLLSQAEEEFGYEHPMGGLTIPCSEDLKSLKQSIQTMGFRLPGIRKALFAANQASSKAVDAPKGYLAVYVGEKMKRFVIPVSYLNQPSFQDLLSQAEEEFRYEHPMGGLTIPCSEDVFRRITSCLNGQ 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01897 182 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 108 179 IPR003676 GO:0009733
Pumo11g01897 182 Pfam Auxin responsive protein 16 80 IPR003676 GO:0009733
Pumo11g01897 182 Pfam Auxin responsive protein 103 179 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01897 Pumo-Chr11 50749141 50750749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01897 24 89 Calmodulin-binding Proteins AT3G43120 52.239 5.03e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01897 - K14488 aip:110269930 251.521