Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01895 ATGCATGAAGAAACATTAGGTTCTCAGGTGGGTAATTTGTTGGCCATTATCTCAGAAGGGAACACAAGTCATTGCATCCCTGAAGTATCAGAATTCAATTATTTCTTTCATATACAAGTCCTTTGTACTATTTGTTTTGTGGAGCAACAGAATACAATGGGTTTCCACATAGCAGGTATTATTAGGCGGGCATCATTTTCTACAACCCAAGCAGCCTCCAAGGGGGTTGAAGTACCGAAAGGCTATCTTGCAGTCTATGTTGGAGATAAGATGAGGCGGTTCATGATTCCAGTAACATACTTGAACCAACCTTCATTTCAAAAATTACTAAGTCAAGCAGAAGAAGAATTCGGATATGATCATCCAACTGGTGGTCTCACAATTCCATGCAAAGAGGATGTGTTCCTAAACATCACCTCTCATTTGAATGAGCTGTAA 438 0.3973 MHEETLGSQVGNLLAIISEGNTSHCIPEVSEFNYFFHIQVLCTICFVEQQNTMGFHIAGIIRRASFSTTQAASKGVEVPKGYLAVYVGDKMRRFMIPVTYLNQPSFQKLLSQAEEEFGYDHPTGGLTIPCKEDVFLNITSHLNEL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01895 145 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 72 142 IPR003676 GO:0009733
Pumo11g01895 145 Pfam Auxin responsive protein 63 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01895 Pumo-Chr11 50738839 50739631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01895 67 135 Calmodulin-binding Proteins AT3G43120 52.174 5.46e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01895 K14488 - gmx:100786095 173.326