Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01894 ATGGGTTTTCGTTTACCTGGTATCAGAAAGGCATTATTTGCAGCCAATCAAGCATCTTCAAAAGCGGTGGATGCACCAAAGGGCTACCTTGCAATCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTGTGTCATATTTGAACCAACCTTCATTTCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGAGCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCCGACATATAACTTCTTGCTTGAATGGACAATAA 279 0.4301 MGFRLPGIRKALFAANQASSKAVDAPKGYLAIYVGEKMKRFVIPVSYLNQPSFQDLLSQAEEEFGYEHPMGGLTIPCSEDVFRHITSCLNGQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01894 92 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
Pumo11g01894 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01894 Pumo-Chr11 50736825 50737194 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01894 24 92 Calmodulin-binding Proteins AT3G43120 46.377 1.50e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01894 K14488 - gmx:100820621 181.415