Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01893 ATGGGTTTCCGCATACCAGGTCTTATGAGACAGGCATCATTTTCTGCTGCCAAAGCAACTCGCAAGGGACTTGAAGTCCCAAAAGGCTATCTTGCAGTCTATGTTGGAGATAAGATGAGGCGGTTTGTGATTCCAGTATCATATTTGAACCAACCTTCATTTCAACAATTACTAAGTCAAGCTGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGTCTTACAATTCCATGCAAAGAGGATGAGTTTCTAAACCTCACTTCTCGCTTGAATGAGCTGTAA 282 0.4184 MGFRIPGLMRQASFSAAKATRKGLEVPKGYLAVYVGDKMRRFVIPVSYLNQPSFQQLLSQAEEEFGYDHPMGGLTIPCKEDEFLNLTSRLNEL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01893 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 20 90 IPR003676 GO:0009733
Pumo11g01893 93 Pfam Auxin responsive protein 13 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01893 Pumo-Chr11 50735482 50735918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01893 25 83 Calmodulin-binding Proteins AT3G43120 57.627 9.35e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01893 K14488 - gmx:100782363 176.022