Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01887 ATGGCCGCAGCATCACCCACTCTCTCATCTTCCCTCTCCAAACCCTCCTCTCTCCCTTTTCAAACCCACTCTTTCCCCAAAACCCTACCATCTCCCCCTCGCGCCGCCGTCAAAACCCCTCTCCTCGTTCTCTCCAAAAACCCGATTTCCGACATCGTCTCCTACACCCCGCCAAGCGCCGAAGCCGCGTGGGACGACGAGAAGCCGCGCGAGGAGTGCGGCGTGGTGGGCATATACGGCGACCCTGAGGCCTCGCGCCTCTGCTACCTTGCCCTGCACGCGCCTCCAGCACCGCGGCCAGGAAGGCGCCGGAATCGTGACGGTCCACAACAACGTCCTCCAATCCATCACCTGGCGTCGGGCCTCGTCTCCGACGTCTTCAATCAATCCAAGCTCGACCAGCTCCCCGGCAGCCTCGCCATCGGCCACGTCCGCTACTCCACCGCCGGCCAATCCATGTTGAAAAACGTGCAACCTTTTGTCGCCGGCTACCGCTTCGGCTCCGTCGGTGTGGCCCACAACGGCAACCTGGTCAACTACCGCACCCTCCGAAGCAACCTGGAGGACAGCGGCTCCATCTTCAACACCACTTCCGACACGGAAGTCGTCCTCCACCTCATCGCCACCTCCAAACACAGACCTTTCATTTTGAGAATCGTTGATGCCTGTGAAAAGCTCGAGGGGGCTTATTCCATTGTCTTCGTCACCGAGGACAAGCTTGTCGCCGTTCGCGACCCTTTCGGGTTCAGGCCTTTGGTTATGGGAAGGAGAAGCAACGGTGCTGTTGTTTTTGCTTCGGAAACCTGTGCTCTTGATTTGATTGAAGCCACTTATGAGAGGGAGGTTTACCCTGGTGAGGTTCTCGTGGTGGATAAAAACGGTGTTCAGAGTCTGTGCCTCATGTCTCATCCTCAACCGAAGCAATGCATTTTTGAACACATTTACTTTGCGCTGCCCAATTCGGTTGTTTTTGGGAGGTCTGTGTATGAATCTCGGAGACAATTTGGGGAGATTTTGGCGACTGAGAGTCCTGTGGACTGTGATGTTGTGATTGCTGTTCCCGATTCTGGTGTTGTGGCTGCCCTTGGTTATGCTGCAAAAGCTGGAGTTCCCTTTCAGCAGGGTTTGATTAGGTCACACTATGTGGGGAGGACTTTCATTGAGCCCTCTCAGAAAATTAGGGACTTTGGTGTGAAGCTGAAGCTATCACCCGTTCGTGCTGTGCTTGAAGGCAAACGCGTTGTGGTTGTGGATGATTCCATTGTGAGAGGAACCACATCGTCCAAGATAGTTAGGTTGTTGAAGGAGGCTGGTGCTAAGGAGGTTCACATGAGGATTGCAAGTCCTCCAATTATTGGGTCTTGTTATTATGGGGTGGATACTCCTAGTTCTGAGGAGTTGATTTCGAATAGGATGAGTGTGGAGGAGATAAGGGACTTTATTGGGTCAGATTCGCTGGCCTTTTTGCCTTTTGATAGCTTGAAGAAGTTGTTGGGGAGTGAAAGTCCGAATTTTTGTTATGCTTGTTTCTCTGGGAATTACCCTGTGGAGCCCAGAGAGCTTAAGGTGAAGAGGGTTGGGGACTTTGTGGATGATGGCTTGAATGGGAGCTTGGAGTCTATTGATGGTGGTTGGGTTCAAGCAAACCGAAATCAAATCAAGGTTGGTACTGGTACTAGTACTACTACTAGTATTTGA 1698 0.5265 MAAASPTLSSSLSKPSSLPFQTHSFPKTLPSPPRAAVKTPLLVLSKNPISDIVSYTPPSAEAAWDDEKPREECGVVGIYGDPEASRLCYLALHAPPAPRPGRRRNRDGPQQRPPIHHLASGLVSDVFNQSKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRSNLEDSGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPFDSLKKLLGSESPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANRNQIKVGTGTSTTTSI 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01887 565 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 71 521 - -
Pumo11g01887 565 MobiDBLite consensus disorder prediction 1 34 - -
Pumo11g01887 565 MobiDBLite consensus disorder prediction 94 115 - -
Pumo11g01887 565 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 73 293 IPR017932 -
Pumo11g01887 565 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 70 325 IPR029055 -
Pumo11g01887 565 Gene3D - 333 497 IPR029057 -
Pumo11g01887 565 Hamap Amidophosphoribosyltransferase [purF]. 72 514 IPR005854 GO:0004044|GO:0009113
Pumo11g01887 565 Pfam Phosphoribosyl transferase domain 348 443 IPR000836 -
Pumo11g01887 565 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 73 515 IPR029055 -
Pumo11g01887 565 CDD PRTases_typeI 336 447 IPR000836 -
Pumo11g01887 565 NCBIfam amidophosphoribosyltransferase 73 515 IPR005854 GO:0004044|GO:0009113
Pumo11g01887 565 MobiDBLite consensus disorder prediction 1 28 - -
Pumo11g01887 565 Pfam Glutamine amidotransferase domain 152 271 IPR017932 -
Pumo11g01887 565 CDD GPATase_N 73 324 IPR035584 -
Pumo11g01887 565 SUPERFAMILY PRTase-like 309 520 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01887 Pumo-Chr11 50610567 50613119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01887 54 547 PRT Gene Family AT2G16570 80.962 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01887 K00764 - gmx:100801720 989.564