Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01886 ATGGGAGAAAATGAAGAAGCGACGAATGACATGATGCAGAGGCTTCACTTTCTGAAACAGCCGTTAAACATGGAGCAACTTAGCATCCCGCAATTCAACCCCTCGCAAATGCGCGCGAGGCAGCATCATCATCAGAATCAGTTCGACGGTGGGAACAGTAACAAGCGTGCGGGTATACCACCCTCGCACCCGCACCAGATCCCGCCCATTTCGCCGTACTCTCAGATCCCGGTGTCGCGTCAGCAGCAGCAGCAGCAAATGGGGTCGCACAGCAACATTTCTCCTACACCCACCCACACGCGATCACTCTCGCAGCCCTCGTTTTTCTCGCTGGATTCCCTCCCCCCTCTCAGCCCTTCACCCTTCCGCGACTCCTCCTCAACTTCCGTGTCCGAAGCTGCTGACGTGTCAATGGAAGATCGCGACGTGAGTTCTCATTCCCTGTTGCCACCCTCACCTTTCTCCAGAACACTCAACACCACCACCACCAATAATAACAGTAATTTACCTTTGCCCCCTCGCAAAGCGCATAGACGCTCTAACAGTGACATTCCGTTTGGGTTTTCCACCGTTTTGCAATCCTCGCCGCCGCTTATCCCTCTTCGGAACCCCGTTTCGGCGAAGCCTGCTCAGTTGGTGAAACGGGAAACGCCGTGGGACAGGGGTGTTGAGAATAATAATGTAGAGGGATCCGGGGAGAAGAAATCCCCTGAAGGGGAAGTCGTGGATGATCTTTTCTCTGCTTACATGAATTTGGATAGCTTTGATGCGTTGAACTCTTCTGGAACCGATGATAAAAACGGGGCCGAAAATCGCGATGATTTGGATAGTAGAGCGAGTGGGACTAAGACTAATGGTGGTGACAGTAGCGATAATGAAGCTGAAAGTAGTGTTAATGAGAGTGGGGATGGTGGGGTGAGGCAAGGAGTGAGTGAGAAGAGGGAAGGGATGAAGAGGAGTGCTGGGGGTGAGATTGCACCCACCACTAGGCACTATAGGAGTGTCTCCATGGATAGTTTCATTGGGAAGTTGAATTTCGGTGACGAGTCGCCAAAGCTGCCGCCTTCGCCGGGGCAAAGGACCGGTTTGATGTCCCCTGCCGGTGGAATTGATGGGAATTCGACGGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTTAGTGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAGCTTGCTGAGATTGCCTTGACCGATCCAAAGCGTGCGAAAAGGATTTTGGCCAACCGGCAATCGGCTGCACGATCCAAAGAGCGGAAGATGCGGTACATTTCGGAGCTGGAGCACAAGGTTCAGACTCTACAGACGGAAGCCACCACGCTATCTGCACAGCTTACTCTGTTACAGAGAGATTCTGCTGGACTCACTAACCAGAATAGTGAGTTGAAGTTTCGCCTTCAATCCATGGAACAACAAGCAAAGCTCCGAGATGCTCTAAATGAGGCACTTACTGCTGAGGTTCAAAGACTAAAGCTTGCTACAGCTGAATTGAGTGGGGATTCGCATGTTTCTAGCTGTTTGATTCCTCAACATTCAGTTAACCCTCTCATGTTCCAGCAGCAGCAGCCTCCTACTGCATCCCAACAAAACATTCATCTTCAACAGCAACAGCAACAGCAACAGCAGCAGCACCAGAATGGTAATGCCAACTCTAATTCCGACTTAAAACAATAG 1698 0.5082 MGENEEATNDMMQRLHFLKQPLNMEQLSIPQFNPSQMRARQHHHQNQFDGGNSNKRAGIPPSHPHQIPPISPYSQIPVSRQQQQQQMGSHSNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVSSHSLLPPSPFSRTLNTTTTNNNSNLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRNPVSAKPAQLVKRETPWDRGVENNNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGAENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDGGVRQGVSEKREGMKRSAGGEIAPTTRHYRSVSMDSFIGKLNFGDESPKLPPSPGQRTGLMSPAGGIDGNSTAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELSGDSHVSSCLIPQHSVNPLMFQQQQPPTASQQNIHLQQQQQQQQQQHQNGNANSNSDLKQ 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01886 565 MobiDBLite consensus disorder prediction 36 182 - -
Pumo11g01886 565 MobiDBLite consensus disorder prediction 527 565 - -
Pumo11g01886 565 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 127 559 - -
Pumo11g01886 565 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 407 470 IPR004827 GO:0003700|GO:0006355
Pumo11g01886 565 MobiDBLite consensus disorder prediction 259 328 - -
Pumo11g01886 565 MobiDBLite consensus disorder prediction 207 239 - -
Pumo11g01886 565 CDD bZIP_plant_RF2 410 461 IPR044759 GO:0003700|GO:0006355
Pumo11g01886 565 MobiDBLite consensus disorder prediction 148 171 - -
Pumo11g01886 565 MobiDBLite consensus disorder prediction 72 134 - -
Pumo11g01886 565 FunFam probable transcription factor PosF21 408 461 - -
Pumo11g01886 565 Gene3D - 408 461 - -
Pumo11g01886 565 MobiDBLite consensus disorder prediction 36 53 - -
Pumo11g01886 565 MobiDBLite consensus disorder prediction 214 239 - -
Pumo11g01886 565 MobiDBLite consensus disorder prediction 280 304 - -
Pumo11g01886 565 SUPERFAMILY Leucine zipper domain 409 460 IPR046347 GO:0003700|GO:0006355
Pumo11g01886 565 SMART brlzneu 405 469 IPR004827 GO:0003700|GO:0006355
Pumo11g01886 565 Pfam bZIP transcription factor 409 467 IPR004827 GO:0003700|GO:0006355
Pumo11g01886 565 Coils Coil 425 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01886 Pumo-Chr11 50598557 50602155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01886 1 528 bZIP Transcription Factor Family AT4G38900 57.168 7.83e-180 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo11g01886 bZIP_1 2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01886 - - gmx:780560 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01886 11 50598557 50602155 Pumo11g01886 11 50598557 50602155 ECH